DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab3 and RAB31

DIOPT Version :10

Sequence 1:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_006859.2 Gene:RAB31 / 11031 HGNCID:9771 Length:195 Species:Homo sapiens


Alignment Length:198 Identity:63/198 - (31%)
Similarity:109/198 - (55%) Gaps:11/198 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTIT 87
            |:.::|::.|||:|.:.|:..|.|......|:|..|..|||...::..|..|||||||||:.::.
Human     8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLA 72

  Fly    88 TAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQL 152
            ..||||:...:::||:|.:|||.:::.||.::|.:..:|..:.:.|||||:.|.|.:..:..::.
Human    73 PMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEY 137

  Fly   153 ADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLVGGGQKGQRLTDQPQGTPNAN 217
            |:.:|....|||||..:|::.:|:.:     .:....||...    .|..|....::|  |..|:
Human   138 AESIGAIVVETSAKNAINIEELFQGI-----SRQIPPLDPHE----NGNNGTIKVEKP--TMQAS 191

  Fly   218 CNC 220
            ..|
Human   192 RRC 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab3NP_523687.1 Rab3 21..185 CDD:206657 55/161 (34%)
RAB31NP_006859.2 Rab5_related 6..168 CDD:206653 55/164 (34%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 30..42 3/11 (27%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 63..79 8/15 (53%)

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