DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab3 and RAB10

DIOPT Version :10

Sequence 1:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_057215.3 Gene:RAB10 / 10890 HGNCID:9759 Length:200 Species:Homo sapiens


Alignment Length:196 Identity:97/196 - (49%)
Similarity:139/196 - (70%) Gaps:9/196 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTA 78
            |.:.:|.:||||:||:|.||||..|||::||:|.:.|:||:|||||:|||....|::||||||||
Human     2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66

  Fly    79 GQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRV 143
            ||||:.||||:|||||||.:|:||:||..||.::..|:..|..::.::.:.:|:||||||:|:||
Human    67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRV 131

  Fly   144 ISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKM------SESLDADPTLVGGGQK 202
            :...:|.|:|.:.|:.|||||||.|:|::..|..|.:.|..|.      ||::|...   |||..
Human   132 VPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISS---GGGVT 193

  Fly   203 G 203
            |
Human   194 G 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab3NP_523687.1 Rab3 21..185 CDD:206657 87/163 (53%)
RAB10NP_057215.3 Rab8_Rab10_Rab13_like 7..173 CDD:206659 88/165 (53%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 32..46 7/13 (54%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 64..81 13/16 (81%)

Return to query results.
Submit another query.