DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab3 and Rab31

DIOPT Version :10

Sequence 1:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_598446.2 Gene:Rab31 / 106572 MGIID:1914603 Length:195 Species:Mus musculus


Alignment Length:154 Identity:55/154 - (35%)
Similarity:97/154 - (62%) Gaps:0/154 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTIT 87
            |:.::|::.|||:|.:.|:..|.|......|:|..|..|||...::..|..|||||||||:.::.
Mouse     8 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLA 72

  Fly    88 TAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQL 152
            ..||||:...:::||:|.:|||::::.||.::|.:..:|..:.:.|||||:.|.|.:..:..::.
Mouse    73 PMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEY 137

  Fly   153 ADQLGVEFFETSAKENVNVKAVFE 176
            |:.:|....|||||..:|::.:|:
Mouse   138 AESIGAIVVETSAKNAINIEELFQ 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab3NP_523687.1 Rab3 21..185 CDD:206657 55/154 (36%)
Rab31NP_598446.2 Rab5_related 6..168 CDD:206653 55/154 (36%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 30..42 3/11 (27%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 63..79 8/15 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..195
Blue background indicates that the domain is not in the aligned region.

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