Protein Alignment Rab3 and rab3c

DIOPT Version :9

• Sequence 1: NP_001356961.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: XP_002938225.2
• Gene: rab3c / 100496123
• XenbaseID: XB-GENE-494770
• Length: 227
• Species: Xenopus tropicalis
• Alignment Length: 220
• Identity: 172/220 - (78%)
• Similarity: 191/220 - (86%)
• Gaps: 3/220 - (1%)

  Fly     1 MASGGDPKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVF 64
            |||..|.:: |||.:||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog     9 MASVQDTRYGQKDTSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVF 73

  Fly    65 RHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQV 129
            :::||:||||||||||||||||||||||||||||||||:|||:|||:||||.|||||||||||||
 Frog    74 KNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV 138

  Fly   130 ILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADP 194
            |||||||||||:||||.|||:.||:|||.||||.|||:|:|||..||||||||||||||:::.|.
 Frog   139 ILVGNKCDMEDERVISAERGKHLAEQLGFEFFEASAKDNINVKQTFERLVDIICDKMSENIETDA 203

  Fly   195 TLVGGGQKGQRLTDQ-PQGTPNANC 218
            ......|. .||||: |...||..|
 Frog   204 AATAAKQT-TRLTDKAPPQQPNCGC 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_001356961.1	Rab3	21..185	CDD:206657	144/163 (88%)
rab3c	XP_002938225.2	Rab3	30..194	CDD:206657	144/163 (88%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	292	1.000	Domainoid score	I1494
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H23420
Inparanoid	1	1.050	344	1.000	Inparanoid score	I2269
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1218073at2759
OrthoFinder	1	1.000	-	-		FOG0000908
OrthoInspector	1	1.000	-	-		otm48236
Panther	1	1.100	-	-	LDO	PTHR47980
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2742
SonicParanoid	1	1.000	-	-		X578
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	11	11.100