DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab3 and Rab37

DIOPT Version :10

Sequence 1:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001417255.1 Gene:Rab37 / 100364984 RGDID:2319982 Length:253 Species:Rattus norvegicus


Alignment Length:155 Identity:76/155 - (49%)
Similarity:110/155 - (70%) Gaps:1/155 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FKLLIIGNSSVGKTSFLFRYADDSFTS-AFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRT 85
            |.::::|:|.||||.||.::.|.:|.| .|::||||||:.|.|.....||||||||||||||:|:
  Rat    60 FTVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGARVKLQIWDTAGQERFRS 124

  Fly    86 ITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGR 150
            :|.||||.|...:|:||:||:.||::::.|:|:|..|:..:..::|:|||.|:..:|||..|.|.
  Rat   125 VTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDGE 189

  Fly   151 QLADQLGVEFFETSAKENVNVKAVF 175
            .||.:.||.|.|||||..:||:..|
  Rat   190 TLAREYGVPFMETSAKTGMNVELAF 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab3NP_523687.1 Rab3 21..185 CDD:206657 76/155 (49%)
Rab37NP_001417255.1 None

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