DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab3 and rab10

DIOPT Version :10

Sequence 1:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster
Sequence 2:XP_031757371.1 Gene:rab10 / 100145267 XenbaseID:XB-GENE-5947409 Length:200 Species:Xenopus tropicalis


Alignment Length:196 Identity:99/196 - (50%)
Similarity:139/196 - (70%) Gaps:9/196 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTA 78
            |.:.:|.:||||:||:|.||||..|||::||:|.:.|:||:|||||:|||....|::||||||||
 Frog     2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66

  Fly    79 GQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRV 143
            ||||:.||||:|||||||.:|:||:||..||.::..|:..|..::.::.:.:|:||||||||:||
 Frog    67 GQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRV 131

  Fly   144 ISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKM------SESLDADPTLVGGGQK 202
            :...:|.|:|.:.|:.|||||||.|||::..|..|.:.|..|.      ||::|...   |||..
 Frog   132 VPKAKGEQIAREHGIRFFETSAKANVNIEKAFLTLAEDILRKTPVKEPNSENVDISS---GGGVT 193

  Fly   203 G 203
            |
 Frog   194 G 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab3NP_523687.1 Rab3 21..185 CDD:206657 89/163 (55%)
rab10XP_031757371.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 90/165 (55%)

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