Protein Alignment Rab3 and rab6b

DIOPT Version :10

• Sequence 1: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Sequence 2: NP_001090835.1
• Gene: rab6b / 100038231
• XenbaseID: XB-GENE-493829
• Length: 208
• Species: Xenopus tropicalis
• Alignment Length: 241
• Identity: 85/241 - (35%)
• Similarity: 126/241 - (52%)
• Gaps: 54/241 - (22%)

  Fly     1 MASGGD---PKWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKT 62
            |::|||   |..:           |||:.:|..||||||.:.|:..|||.:.:.:|:||||..||
 Frog     1 MSAGGDFGNPLRK-----------FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKT 54

  Fly    63 VFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNA 127
            ::..|:.|:||:||||||||:|::..:|.|.:...:::||:||.:||:....|:..::|....:.
 Frog    55 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFHQTSKWIDDVRTERGSDV 119

  Fly   128 QVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFER--------------- 177
            .::|||||.|:.|:|.|:.|.|.|.|.:|.|.|.|||||...|||.:|.|
 Frog   120 IIMLVGNKTDLADKRQITIEAGEQKAKELNVMFIETSAKTGYNVKQLFRRVASALPGMECSEEKS 184

  Fly   178 ---LVDIICDKMSESLDADPTLVGGGQKGQRLTDQPQGTPNANCNC 220
               ::||..||..|...||                      |.|:|
 Frog   185 KDGMIDIKLDKPQEPQVAD----------------------AGCSC 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	72/181 (40%)
rab6b	NP_001090835.1	Rab6	14..174	CDD:206654	70/159 (44%)