DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and ACA4

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_193831.1 Gene:ACA4 / 827846 AraportID:AT4G20990 Length:267 Species:Arabidopsis thaliana


Alignment Length:276 Identity:75/276 - (27%)
Similarity:116/276 - (42%) Gaps:39/276 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LQFGNTSCSRNSAP-----VYGYDMQHGPHTWLPKSRSSSSSVEEATFFQSPVNIDESQIQRMAI 127
            |.|.|.|.:.:...     .|....:.||..|  ...:....|.....:|||:::..   :|:::
plant    18 LSFPNISHAHSEVDDETPFTYEQKTEKGPEGW--GKINPHWKVCNTGRYQSPIDLTN---ERVSL 77

  Fly   128 RELLSW-NHYDDLPASITLENTGQTLILRAQFHGNAPTISGADLLASYTFLELRFHWGWCNSEGS 191
            ....:| ..|...||.||  |.|..:::..:......||...|      |..::.||    ...|
plant    78 IHDQAWTRQYKPAPAVIT--NRGHDIMVSWKGDAGKMTIRKTD------FNLVQCHW----HSPS 130

  Fly   192 EHTINHRKFPLEMQVMHKTGSGIPRTCTSSYDLLMIGYVFELSAHNPFLDPLVQNLRLVQKPGKR 256
            |||:|..::.||:.::|.:..|  ||.       :||.:::|...|.||..|:..::.|  ..|.
plant   131 EHTVNGTRYDLELHMVHTSARG--RTA-------VIGVLYKLGEPNEFLTKLLNGIKAV--GNKE 184

  Fly   257 VQISPFPISYLMYQFRSGFYSYGGSLTHPPCYQGTEWFIFPESLAISDFQLRHFRLLLGPDGISP 321
            :.:.......:.:|.|. ||.|.||||.|||.:|..|.:......||..|:...|..: .||.. 
plant   185 INLGMIDPREIRFQTRK-FYRYIGSLTVPPCTEGVIWTVVKRVNTISMEQITALRQAV-DDGFE- 246

  Fly   322 IARNSRPVQHMGNRVV 337
              .||||||....|.|
plant   247 --TNSRPVQDSKGRSV 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 70/249 (28%)
ACA4NP_193831.1 PLN02179 1..226 CDD:177835 61/236 (26%)

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