DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and ACA1

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_566971.2 Gene:ACA1 / 824438 AraportID:AT3G52720 Length:284 Species:Arabidopsis thaliana


Alignment Length:337 Identity:75/337 - (22%)
Similarity:138/337 - (40%) Gaps:83/337 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RVLLLIRTPLQFGNTS--C-----SRNSAPVYGYDMQHGPHTW-LPKSRSSSSSVEEATFFQSPV 115
            :::::|:  |.|.:.|  |     ::....|:||..::||:.| ......::.:|.:   .|||:
plant     2 KIMMMIK--LCFFSMSLICIAPADAQTEGVVFGYKGKNGPNQWGHLNPHFTTCAVGK---LQSPI 61

  Fly   116 NIDESQIQRMAIRELLSWNHYDDLPASITLEN--TGQTLILR----AQFHGNAPTISGADLLASY 174
            :|...||         .:||..:   ||..|.  |..||:..    |.|.|..   :|..::.:.
plant    62 DIQRRQI---------FYNHKLN---SIHREYYFTNATLVNHVCNVAMFFGEG---AGDVIIENK 111

  Fly   175 TFLELRFHWGWCNSEGSEHTINHRKFPLEMQVMHKTGSGIPRTCTSSYDLLMIGYVFELSAHNPF 239
            .:..|:.||    ...|||.::..::..|:.::|:...|         ...::..:|::....||
plant   112 NYTLLQMHW----HTPSEHHLHGVQYAAELHMVHQAKDG---------SFAVVASLFKIGTEEPF 163

  Fly   240 LDPLVQNL------RLVQKPGKRVQISPFPISYLMYQFRSGFYSYGGSLTHPPCYQGTEWFIFPE 298
            |..:.:.|      ||......:|::......::..:.|. :|.|.||||.|||.:...|.|..:
plant   164 LSQMKEKLVKLKEERLKGNHTAQVEVGRIDTRHIERKTRK-YYRYIGSLTTPPCSENVSWTILGK 227

  Fly   299 SLAISDFQLRHFRLLLGPDGISPIARNSRPVQHMGNRVVSLNCFCPYDAAQLSRMHVELCQAQAQ 363
            ..::|..|:   .||..|...| ...||||.|.:..|.|.:                        
plant   228 VRSMSKEQV---ELLRSPLDTS-FKNNSRPCQPLNGRRVEM------------------------ 264

  Fly   364 EEHEEERIEQEQ 375
             .|:.||:::::
plant   265 -FHDHERVDKKE 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 64/261 (25%)
ACA1NP_566971.2 alpha_CA 1..284 CDD:469577 75/337 (22%)

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