DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and ca13.2

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001072785.1 Gene:ca13.2 / 780246 XenbaseID:XB-GENE-29208903 Length:258 Species:Xenopus tropicalis


Alignment Length:239 Identity:66/239 - (27%)
Similarity:112/239 - (46%) Gaps:9/239 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 TFFQSPVNIDESQIQRMAIRELLSWNHYDDLPASITLENTGQTLILRAQFHGNAPTISGADLLAS 173
            |..|||:||:....:.....:.|.:: ||...|. .:.|.|....:..:...:...:|...|...
 Frog    13 THHQSPININTRTAKYNPSLKPLKFS-YDPKTAK-RIVNVGHCFNVEFEDICDKSVLSEGPLDGH 75

  Fly   174 YTFLELRFHWGWCNSEGSEHTINHRKFPLEMQVMH---KTGSGIPRTCTSSYDLLMIGYVFELSA 235
            |...:..||||..:.:||||.|:...:|.|:.::|   |..:...........:.::|...:|..
 Frog    76 YRLCQFHFHWGSSDRDGSEHNIDGHLYPAELHIVHWNSKKYTSFAEAAKHPDGVAVVGVFLKLGN 140

  Fly   236 HNPFLDPLVQNLRLVQKPGKRVQISPFPISYLMYQFRSGFYSYGGSLTHPPCYQGTEWFIFPESL 300
            .||.|..:::||..|:..||....:.|.::.|:.: ...:::|.||||..|.::...|.|..|::
 Frog   141 TNPALQSIIENLDKVKTKGKACPFTEFHLNGLLPE-DLNYWTYMGSLTTKPYFECVTWIILQEAI 204

  Fly   301 AISDFQLRHF-RLLLGPDGISP--IARNSRPVQHMGNRVVSLNC 341
            .:|..||..| ||....:..:|  |..|.||||.:.:|||..:|
 Frog   205 TVSSQQLEQFRRLQCTSENENPSFILENHRPVQPLDHRVVYSSC 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 65/235 (28%)
ca13.2NP_001072785.1 alpha_CA 16..247 CDD:469577 64/233 (27%)

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