DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and ca6

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001072482.1 Gene:ca6 / 779937 XenbaseID:XB-GENE-494019 Length:121 Species:Xenopus tropicalis


Alignment Length:111 Identity:30/111 - (27%)
Similarity:53/111 - (47%) Gaps:13/111 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 YTFLELRFHWGWCNSE--GSEHTINHRKFPLEMQVMHKTGSGIPRTCTSSYD----LLMIGYV-- 230
            ||.:::..|||...||  ||||||:..::..|:.|:| ..||..:|...:.|    |.::.::  
 Frog    11 YTAVQMHLHWGGLESETSGSEHTIDGMRYLAELHVVH-YNSGTYKTFDEAKDKPNGLAVLAFLYT 74

  Fly   231 ---FELSAHNPFLDPLVQ-NLRLVQKPGKRVQISPFPISYLMYQFR 272
               :|.:.::.|:..|.: ...::..|...:....|..|||....|
 Frog    75 TGNYENTYYSDFISKLSKIRYAVICPPRPSLFDHVFAYSYLYRDHR 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 30/111 (27%)
ca6NP_001072482.1 alpha_CA <1..>96 CDD:469577 24/85 (28%)

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