DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and zgc:153760

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001070086.1 Gene:zgc:153760 / 767680 ZFINID:ZDB-GENE-060929-528 Length:324 Species:Danio rerio


Alignment Length:322 Identity:67/322 - (20%)
Similarity:119/322 - (36%) Gaps:104/322 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 FGNTSCS----RNSAPVYGYDMQHGPHTWLPKSRSSSSSVEEATFFQSPVNIDESQIQRMAIREL 130
            :.|.:|:    .|.||.|                .:.||       |||::|..:|:|.......
Zfish    28 YNNPACNFPNWPNIAPQY----------------CNGSS-------QSPIDIVTAQVQGNPNLTQ 69

  Fly   131 LSWNHYDDLPASITLENTGQTLILRAQFHGNAPTISGADLLASYTFLELRFHWGWCNS-EGSEHT 194
            .....:|......::.|:|.::::  ....:..::.|.||...|..::...|||..:| .|||||
Zfish    70 FILTGFDANTTFTSITNSGTSVVV--SLDEDIMSVQGGDLPGLYVSVQFHLHWGSSSSLPGSEHT 132

  Fly   195 INHRKFPLEMQV--MHKTGSGIPRTCTSSYD---LLMIGYVFE-----------------LS--- 234
            ::.:::.:|:.:  :|.|.:|......::.|   |.::|:..|                 ||   
Zfish   133 VDGKQYAMELHIVNLHSTYNGNVSAALAANDSSALAVLGFFIEGTDEADKTNSWDVFTSFLSNIP 197

  Fly   235 ----AHNPFLDPLVQNLRLVQKPGKRVQISPFPISYLMYQFRSGFYSYGGSLTHPPCYQGTEWFI 295
                .:...:|.:..|                  |.|....::.:|.|.||||.|||.:...|.:
Zfish   198 NSGNTYTDIMDQITMN------------------SLLEGVNKTKYYRYQGSLTTPPCNEDVIWTV 244

  Fly   296 FPESLAI-------------------SDFQLRHFRLLLGPDGISPIARNSRPVQHMGNRVVS 338
            |.|.:.:                   ||..:.:||      |:.|:  |.|.|.....:.||
Zfish   245 FKEPIKVNNNLINRFCTKVFAKTAKASDLNVNNFR------GVQPL--NGRVVTSQVEQTVS 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 61/298 (20%)
zgc:153760NP_001070086.1 alpha_CA_IV_XV_like 48..291 CDD:239391 59/277 (21%)

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