DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and ca5b

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001039155.1 Gene:ca5b / 733981 XenbaseID:XB-GENE-1003819 Length:319 Species:Xenopus tropicalis


Alignment Length:265 Identity:76/265 - (28%)
Similarity:116/265 - (43%) Gaps:28/265 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 QSPVNIDESQIQRMAIRELLSWNH--YDDLPASITLENTGQTLILRAQFHGNAPTISGADLLASY 174
            |||:||   :|:.......|:..|  ||. ...:.:.|.|.:..:......:..|:||..|...:
 Frog    66 QSPINI---RIRDSVFHPQLAPVHTQYDP-NTCLYIWNNGYSFFVEYDDSTDKSTVSGGPLENPF 126

  Fly   175 TFLELRFHWGWCNSEGSEHTINHRKFPLEMQVMHKTGSGIPRTCTSSY----DLLMIGYVFELSA 235
            ...:..||||..|..|||||::.|.||.|:.::|...|.. ||...:.    .|.:||...::..
 Frog   127 RLKQFHFHWGRNNDWGSEHTVDSRVFPAELHLVHWNCSKY-RTFEEAIMEPNGLAVIGVFLKVGK 190

  Fly   236 HNPFLDPLVQNLRLVQKPGKRVQISPFPISYLMYQFRSGFYSYGGSLTHPPCYQGTEWFIFPESL 300
            |:..|..||..|..|:......:.:.|..|.|:... ..:::|.||||.||..:...|.|..:.:
 Frog   191 HHEKLQKLVDILPSVRYKDALTEFNYFDSSCLLPSC-GDYWTYSGSLTTPPLTESVTWIIMKKPI 254

  Fly   301 AISDFQLRHFRLLL----GPDGISPIARNSRPVQHMGNRVVSLNCFCPYDAAQLSRMHVELCQAQ 361
            .:...||..||.||    |.:. ..:..|.||:|.:.||.|. :.|.|  |.|:..        :
 Frog   255 EVDHSQLAVFRSLLFTAVGEEE-RYMVDNFRPLQPLMNRTVH-SSFEP--ALQIPH--------K 307

  Fly   362 AQEEH 366
            ..|||
 Frog   308 KSEEH 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 69/236 (29%)
ca5bNP_001039155.1 alpha_CA_V 63..298 CDD:239392 69/239 (29%)

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