DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH13 and ca10b

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_696967.3 Gene:ca10b / 568543 ZFINID:ZDB-GENE-080815-2 Length:326 Species:Danio rerio


Alignment Length:266 Identity:72/266 - (27%)
Similarity:112/266 - (42%) Gaps:68/266 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 QSPVNIDESQIQRMAIRELLSWNHYDDLP---------ASITLENTGQTLILRAQFHGNAPTISG 167
            ||||||:.|   ||.....|:       |         .|.|:.|||:.:.||.. ..:...|||
Zfish    65 QSPVNIETS---RMIFDPFLN-------PLRLNAGQRKVSGTMYNTGRHVSLRPD-KSHLVNISG 118

  Fly   168 ADLLASYTFLELRFHWGWCNSEGSEHTINHRKFPLEMQVMH-------------KTGSGIPRTCT 219
            ..|..||...|:|.|:|..::.||||.:|.:.||.|:|::|             ::.:||     
Zfish   119 GPLSYSYRLEEIRLHFGSEDNRGSEHLLNGQAFPGEVQLIHYNQDLYLNYSDAVRSPNGI----- 178

  Fly   220 SSYDLLMIGYVFELS-AHNPFLDPLVQN---LRLVQKPGKRVQISPFPISYL--------MYQFR 272
                 .::....::| ..|.||:.::..   .|:..|..          :||        :|...
Zfish   179 -----AVVSIFMKISEPTNVFLNRMLNRETVTRITYKHD----------AYLLMGLNIEELYPET 228

  Fly   273 SGFYSYGGSLTHPPCYQGTEWFIFPESLAISDFQLRHFRLLL--GPDGI-SPIARNSRPVQHMGN 334
            |.|.:|.||:|.|||.:...|.:..:.:.||..:::..|||.  .|..| ..:..|.||.|.:..
Zfish   229 SRFITYEGSITIPPCLETATWILMNKPIYISQIEMQSLRLLSQNQPSQIFLSMGDNMRPTQTLHQ 293

  Fly   335 RVVSLN 340
            |.:..|
Zfish   294 RCIRTN 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 71/263 (27%)
ca10bXP_696967.3 alpha_CARP_X_XI_like 45..301 CDD:239395 72/266 (27%)

Return to query results.
Submit another query.