DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and ca7

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_957107.1 Gene:ca7 / 564201 ZFINID:ZDB-GENE-040426-1786 Length:263 Species:Danio rerio


Alignment Length:271 Identity:65/271 - (23%)
Similarity:114/271 - (42%) Gaps:34/271 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 YGYDMQHGPHTW---LPKSRSSSSSVEEATFFQSPVNIDESQIQRMAIRE------LLSWNHYDD 138
            :||...:||..|   .|.:..:.         |||::|..|:    |:.:      .||:|:.  
Zfish     6 WGYGEDNGPSAWHKDYPIAEGNR---------QSPIDIVPSE----AVFDSKLSPISLSYNNC-- 55

  Fly   139 LPASITLENTGQTLILRAQFHGNAPTISGADLLASYTFLELRFHWGWCNSEGSEHTINHRKFPLE 203
              .|:::.|.|.::::..........|:|..|...|...:..||||.....|||||:..:.|..|
Zfish    56 --TSLSISNNGHSVVVEFVDTDERSVITGGPLENMYRLKQFHFHWGSKGCCGSEHTVAGKTFVSE 118

  Fly   204 MQVMHKTGS---GIPRTCTSSYDLLMIGYVFELSAHNPFLDPLVQNLRLVQKPGKRVQISPFPIS 265
            :.::|...:   .......:...|.::|...|....:..|..:...|.:|:..|...:...|...
Zfish   119 LHLVHWNANKYKSFSEAAAAPDGLAVLGIFLETGDEHRALHQITDALYMVRFKGSLAEFKGFNPK 183

  Fly   266 YLMYQFRSGFYSYGGSLTHPPCYQGTEWFIFPESLAISDFQLRHFRLLL----GPDGISPIARNS 326
            .|:..... :::|.||||.||.|:...|.:..|.:.:|:.|:..||.||    ..:..:.:..|.
Zfish   184 CLLPNSLE-YWTYPGSLTTPPLYESVTWIVLKEPIYVSEKQMGKFRTLLFNGEEEEDRNRMENNY 247

  Fly   327 RPVQHMGNRVV 337
            ||.|.:..|:|
Zfish   248 RPPQPLKGRMV 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 63/264 (24%)
ca7NP_957107.1 alpha_CA_VII 26..262 CDD:239402 59/251 (24%)

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