DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and ca8

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001011213.1 Gene:ca8 / 496646 XenbaseID:XB-GENE-953676 Length:282 Species:Xenopus tropicalis


Alignment Length:256 Identity:70/256 - (27%)
Similarity:109/256 - (42%) Gaps:47/256 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 FQSPVNIDESQIQRMAIRELLSWNHYDDLPASITLE------------NTG---QTLILRAQFHG 160
            :|||:||:.        ||.:    ||.....:.|.            |.|   |.|:.......
 Frog    40 YQSPININS--------REAM----YDPSLLEVRLTPSYVVCRDCEVINDGHVVQILLKSKSVLK 92

  Fly   161 NAPTISGADLLASYTFLELRFHWGWCNSEGSEHTINHRKFPLEMQVMHKTGS---GIPRTCTSSY 222
            ..|...|.:    |...|:|||||..|..|||||:|.:.||:|:.::|...:   .:.......:
 Frog    93 GGPLPRGHE----YELNEVRFHWGKENQRGSEHTVNFKAFPMELHLIHWNSTLYRSLEEAMGKVH 153

  Fly   223 DLLMIGYVFELSAHNPFLDPLVQNLRLVQKPGKRVQISPF-PISYLMYQFRSGFYSYGGSLTHPP 286
            .:::|....::...|..|..:.:.|:.:...||...|..| |.:.|.......::.|.||||.||
 Frog   154 GIVIISLFVQIGKENIGLKAITEVLQDIFYKGKSKTIPCFNPNTLLPDPLLRDYWVYEGSLTMPP 218

  Fly   287 CYQGTEWFIFPESLAISDFQLRHFRLLL----------GPDGISPIARNSRPVQHMGNRVV 337
            |.:|..|.:|...|.:|..|:..||.|.          |.||:  :|.|.||.|.:.:|::
 Frog   219 CSEGVTWILFRYPLTVSQTQIEEFRRLRTHIKGADLPDGCDGL--MADNFRPTQPLSDRII 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 70/256 (27%)
ca8NP_001011213.1 alpha_CARP_VIII 26..281 CDD:239394 70/256 (27%)

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