Protein Alignment CAH13 and CARPA

DIOPT Version :10

• Sequence 1: NP_610602.2
• Gene: CAH13 / 36126
• FlyBaseID: FBgn0033542
• Length: 527
• Species: Drosophila melanogaster
• Sequence 2: NP_572407.3
• Gene: CARPA / 31687
• FlyBaseID: FBgn0029962
• Length: 333
• Species: Drosophila melanogaster
• Alignment Length: 297
• Identity: 86/297 - (28%)
• Similarity: 122/297 - (41%)
• Gaps: 80/297 - (26%)

  Fly    85 YDMQHGPHTW---------LPKSRSSSSSVEEATFFQSPVN-IDESQIQRMAIRELLSWNHYDDL 139
            ||...||..|         ..|.|.           |||:: :.:..:....:|.|    |.|..
  Fly    41 YDGISGPSFWGLINPQWNMCNKGRR-----------QSPIDVVPDKLLFDPYLRPL----HIDKH 90

  Fly   140 PASITLENTGQTLILR----AQFHGNAPTISGADLLASYTFLELRFHWGWCNSEGSEHTINHRKF 200
            ..|.||.||||:|:.|    .:.|.|   |||..|...|.|.|:..|:|..|..||||.|....|
  Fly    91 KVSGTLHNTGQSLVFRVDKDTKQHVN---ISGGPLAYRYQFEEIYIHYGTENVRGSEHFIQGYSF 152

  Fly   201 PLEMQV--------------MHKTGSGIPRTCTSSYDLLMIGYVFELSAHNPFLDPLVQNLRLVQ 251
            |.|:|:              .||: .||.....    ::.||     ...||       .||::.
  Fly   153 PGEIQIYGFNKELYHNMSEAQHKS-QGIVGLSL----MVQIG-----ETPNP-------ELRIIT 200

  Fly   252 KPGKRVQISPF--PISYLMYQFRS------GFYSYGGSLTHPPCYQGTEWFIFPESLAISD---F 305
            ....:|....|  ||.::  ..||      .:.:|.||.|||.|::.|.|.|..:.:.|:.   :
  Fly   201 STFNKVLYRGFSTPIRHI--SVRSLLPNTDHYITYEGSTTHPGCWESTVWIIVNKPIYITKQELY 263

  Fly   306 QLRHFRLLLGPDGI--SPIARNSRPVQHMGNRVVSLN 340
            |||  ||:.|.:..  :|:..|:||||.:.:|.|..|
  Fly   264 QLR--RLMQGSESTPKAPLGNNARPVQSLHHRTVRTN 298

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CAH13	NP_610602.2	alpha_CARP_receptor_like	90..339	CDD:239396	83/289 (29%)
CARPA	NP_572407.3	alpha_CARP_X_XI_like	46..300	CDD:239395	84/292 (29%)