DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH13 and cahz

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_571185.1 Gene:cahz / 30331 ZFINID:ZDB-GENE-980526-39 Length:260 Species:Danio rerio


Alignment Length:268 Identity:73/268 - (27%)
Similarity:121/268 - (45%) Gaps:24/268 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 APVYGYDMQHGPHTWLPKSRSSSSSVEEATFFQSPVNIDESQIQRMAIRELLSWNH----YDDLP 140
            |..:||....||.:|     :.|..:.... .|||::|..:|.|...     |..|    ||  |
Zfish     2 AHAWGYGPADGPESW-----AESFPIANGP-RQSPIDIVPTQAQHDP-----SLKHLKLKYD--P 53

  Fly   141 ASI-TLENTGQTLILRAQFHGNAPTISGADLLASYTFLELRFHWGWCNSEGSEHTINHRKFPLEM 204
            |:. ::.|.|.:..:......|:.|::|..:...|...:..||||..:.:||||||...|||.|:
Zfish    54 ATTKSILNNGHSFQVDFVDDDNSSTLAGGPITGIYRLRQFHFHWGSSDDKGSEHTIAGTKFPCEL 118

  Fly   205 QVMHKTGS--GIPRTCTSSYDLLMIGYVFELSAHNPFLDPLVQNLRLVQKPGKRVQISPFPISYL 267
            .::|....  ......:....|.::|...::.|.||.|..::..|..::..|::...:.|....|
Zfish   119 HLVHWNTKYPNFGEAASKPDGLAVVGVFLKIGAANPRLQKVLDALDDIKSKGRQTTFANFDPKTL 183

  Fly   268 MYQFRSGFYSYGGSLTHPPCYQGTEWFIFPESLAISDFQLRHFR-LLLGPDGISP--IARNSRPV 329
            : .....:::|.||||.||..:...|.:..|.:::|..|:..|| ||...:|.:|  :..|.||.
Zfish   184 L-PASLDYWTYEGSLTTPPLLESVTWIVLKEPISVSPAQMAKFRSLLFSSEGETPCCMVDNYRPP 247

  Fly   330 QHMGNRVV 337
            |.:..|.|
Zfish   248 QPLKGRKV 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 70/258 (27%)
cahzNP_571185.1 alpha_CA_I_II_III_XIII 1..259 CDD:239393 73/268 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 9/34 (26%)

Return to query results.
Submit another query.