DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and Ptprz1

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_037212.2 Gene:Ptprz1 / 25613 RGDID:3455 Length:2316 Species:Rattus norvegicus


Alignment Length:463 Identity:113/463 - (24%)
Similarity:182/463 - (39%) Gaps:76/463 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 QSPVNIDESQIQRMAIRELLSWNHYDDLPASIT-LENTGQTLILRAQFHGNAPTISGADLLASYT 175
            |||:||||...|.....:.|.:..::......| :.|||:|:.:...   |...:||......:.
  Rat    61 QSPINIDEDLTQVNVNLKKLKFQGWEKPSLENTFIHNTGKTVEINLT---NDYYLSGGLSEKVFK 122

  Fly   176 FLELRFHWGWCN--SEGSEHTINHRKFPLEMQVM---HKTGSGIPRTCTSSYDLLMIGYVFELSA 235
            ..::.||||.||  ||||||::..:|||||||:.   ....|....|......|..:..:||:..
  Rat   123 ASKMTFHWGKCNVSSEGSEHSLEGQKFPLEMQIYCFDADRFSSFEETVKGKGRLRALSILFEIGV 187

  Fly   236 -HNPFLDPLVQNLRLVQKPGKRVQISPFPISYLMYQFRSGFYSYGGSLTHPPCYQGTEWFIFPES 299
             .|.....::.....|.:.||:..:.||.:..|:......:|.|.||||.|||....||.:|.::
  Rat   188 EENLDYKAIIDGTESVSRFGKQAALDPFILQNLLPNSTDKYYIYNGSLTSPPCTDTVEWIVFKDT 252

  Fly   300 LAISDFQLRHF--RLLLGPDG----ISPIARNSRPVQHMGNRVVSLNCFCPYDAAQLSRMHVELC 358
            ::||:.||..|  .|.:...|    :..:..|.|..|:..:|.|    |..|...:  .:|..:|
  Rat   253 VSISESQLAVFCEVLTMQQSGYVMLMDYLQNNFREQQYKFSRQV----FSSYTGKE--EIHEAVC 311

  Fly   359 QA-----QAQEEH--------EEERIEQEQQLELERELERQRESDLKAQQEQASEAAIAASEDEG 410
            .:     ||..|:        |..|:..:..:|....|.:..|.:.:.:.|..::    ..:|.|
  Rat   312 SSEPENVQADPENYTSLLITWERPRVVYDTMIEKFAVLYQPLEGNDQTKHEFLTD----GYQDLG 372

  Fly   411 QLIETIDTTTIITSSSN----TSICMTTLMRK-------DSPRQLEQPSQMPMMAPNQ------- 457
            .::     ..:|.:.|.    .:||...|..|       |.|.:..:....|.:...:       
  Rat   373 AIL-----NNLIPNMSYVLQIVAICSNGLYGKYSDQLIVDMPTEDAELDLFPELIGTEEIIKEED 432

  Fly   458 ---GN----FCNPGIVIFSGVNESKSKCGIHQDTPEELMIHNRGTGRNMGVQN--GCKADAFCGV 513
               ||    ..|||  ..|..|:.:.|   ..........::.||..|....|  ..|...|.|.
  Rat   433 YGKGNEEDTGLNPG--RDSATNQIRKK---EPQVSTTTHYNHMGTKYNEAKTNRSPTKGSEFSGK 492

  Fly   514 GDGVNIGI 521
            .|.:|..:
  Rat   493 SDVLNTSL 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 72/239 (30%)
Ptprz1NP_037212.2 alpha_CARP_receptor_like 45..298 CDD:239396 72/243 (30%)
fn3 313..401 CDD:394996 17/96 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 433..499 17/70 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 518..537
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 586..624
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 636..720
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1141..1172
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1204..1228
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1401..1521
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1545..1622
PTP_DSP_cys 1718..1995 CDD:475123
R-PTP-Z-2 2078..2281 CDD:350507
Blue background indicates that the domain is not in the aligned region.

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