DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and LOC1273602

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_312595.6 Gene:LOC1273602 / 1273602 VectorBaseID:AGAMI1_012385 Length:319 Species:Anopheles gambiae


Alignment Length:320 Identity:80/320 - (25%)
Similarity:134/320 - (41%) Gaps:69/320 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LLLIRTPLQFGNTSCSRNSAPVYGYDMQHGPHTWLP--------KSRSSSSSVEEATF------- 110
            |||...|:.|..           ||..:....:|.|        :::...:|.:..::       
Mosquito    15 LLLACQPVVFAR-----------GYAQEDAAGSWHPNEVSYDETEAKGGRTSQQSWSYTLSDALG 68

  Fly   111 --------------FQSPVNIDESQIQRMAIRELLSWNHYDDLPASITLENTGQTLILRAQF-HG 160
                          ||||:||:.|:..::..:..|......:.|..||.||.|.::....:: ..
Mosquito    69 PPNWPIVAPACGGQFQSPININTSRALKVNRKVPLEIVGLKNRPTYITAENEGYSVKFTPKWGFR 133

  Fly   161 NAPTISGADLLASYTFLELRFHWGWCNSEGSEHTINHRKFPLEMQVMHKTG--SGIPRTCTSSYD 223
            ..|.:.|..|..:|.|.::.||||..|||||||.||..:||||:.::...|  ..:.........
Mosquito   134 TRPMMRGGPLKTAYFFEQMHFHWGPNNSEGSEHRINGERFPLEVHLVFYNGLYQSLAEAAGEVDG 198

  Fly   224 LLMIGYV---------FELSAHNPFLDPLVQNLRLVQKPGKRVQISP---FPISYLMYQFRSGFY 276
            |.::|:.         |.|::.:.||..       |::||.:.:|||   |.:..::......:|
Mosquito   199 LAVVGFFYDVVPGSSSFSLNSWSNFLPQ-------VRQPGAKFEISPTRSFSLQDVVGAMGWSYY 256

  Fly   277 SYGGSLTHPPCYQGTEWFIFPESLAISDFQLRHFRLLLGPDG-------ISPIARNSRPV 329
            ||.||||.|||.:...|.:..:.|:.::..:...|.|:...|       .||..:|:|.|
Mosquito   257 SYDGSLTTPPCLETVNWIVSNKRLSATELDMSRLRSLITKQGKQMVLNYRSPQPQNTRRV 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 73/291 (25%)
LOC1273602XP_312595.6 None

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