DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and CARPA

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_061501342.1 Gene:CARPA / 1272307 VectorBaseID:AGAMI1_011182 Length:341 Species:Anopheles gambiae


Alignment Length:350 Identity:93/350 - (26%)
Similarity:137/350 - (39%) Gaps:101/350 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VQHPLITTGLCLLGAFAYHADQETLKEIYQRVLLLIRTPLQFGNTSCSRNSAPVYGYDMQHGPHT 93
            |.||.|...:|.|.|.. |..:.:.:|.:.                          ||...||..
Mosquito     3 VMHPRIFLNVCFLLALG-HEIEASWEEWWT--------------------------YDGISGPAF 40

  Fly    94 W---------LPKSRSSSSSVEEATFFQSPVNIDESQIQRMAIRELLSWNHYDDLPASITLENTG 149
            |         ..|.|.           |||:|::.   :::.....|...|.|....|.||.|||
Mosquito    41 WGLINPQWNMCNKGRR-----------QSPINVEP---EKLLFDPYLRSLHIDKHKISGTLHNTG 91

  Fly   150 QTLILRAQ----FHGNAPTISGADLLASYTFLELRFHWGWCNSEGSEHTINHRKFPLEMQV---- 206
            |:|:.|.:    .|.|   ||...|...|.|.|:.||:|..|::||||.|:...||.|:|:    
Mosquito    92 QSLVFRVEKDTKQHVN---ISSGPLAYRYQFEEIYFHYGTDNNQGSEHHIHGYSFPGEIQLYGFN 153

  Fly   207 ----------MHKTGSGIPRTCTSSYDLLMIGYVFELSAHNPFLDPLVQNLRLVQKPGKRV--QI 259
                      .|| ..||.....    :|.||     ...||       .||::.....:|  :.
Mosquito   154 KELYHNMSEAQHK-AQGIVGISL----MLQIG-----DTPNP-------ELRIITSAFNKVLYKG 201

  Fly   260 SPFPISYLMYQFRS------GFYSYGGSLTHPPCYQGTEWFIFPESLAISDFQLRHFR-LLLGPD 317
            |..||.::  ..||      .:.:|.||.|||.|::.|.|.|..:.:.|:..:|...| |:.|.:
Mosquito   202 SSTPIRHI--SLRSLLPNTEQYMTYEGSTTHPGCWESTVWIILNKPIYITKQELYALRKLMQGSE 264

  Fly   318 GI--SPIARNSRPVQHMGNRVVSLN 340
            ..  :|:..|:||:|.:.:|.|..|
Mosquito   265 QTPKAPLGNNARPLQALHHRTVRTN 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 81/286 (28%)
CARPAXP_061501342.1 None

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