DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH13 and CARPB

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_061519282.1 Gene:CARPB / 1272280 VectorBaseID:AGAMI1_013925 Length:327 Species:Anopheles gambiae


Alignment Length:285 Identity:76/285 - (26%)
Similarity:113/285 - (39%) Gaps:49/285 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 YDMQHGPHTW---------LPKSRSSSSSVEEATFFQSPVNIDESQIQRMAIRELLSWNHYDDLP 140
            ||...||..|         ..|.|.           |||||::.   ||:.....|...|.|...
Mosquito    32 YDGISGPAFWGLINPEWSLCNKGRR-----------QSPVNLEP---QRLLFDPNLRILHIDKHR 82

  Fly   141 ASITLENTGQTLILRAQFHGNAP--------TISGADLLASYTFLELRFHWGWCNSEGSEHTINH 197
            .|.|:.|||.::|..|....::.        .::|..|...|.|.|:..|:|..:..||||::..
Mosquito    83 ISGTITNTGHSVIFTADNETSSAYGTPQIPVNLTGGPLSYRYRFHEIHVHYGLHDQFGSEHSVEG 147

  Fly   198 RKFPLEMQVMHKTGSGIPRTCTSSYD---------LLMIGYVFELSAHNPFLDPLVQNLRLVQKP 253
            ..||.|:|:.............:.|.         ||.:|   :||  ||.|..|...|..::..
Mosquito   148 YTFPAEIQIFGYNSQLYANFSDALYRAQGIVGVAILLQLG---DLS--NPELRMLTDQLERIRYG 207

  Fly   254 GKRVQISPFPISYLMYQFRSGFYSYGGSLTHPPCYQGTEWFIFPESLAISDFQLRHFRLLL--GP 316
            |....:....:..|:.. ...:.:|.||.|.|.||:...|.:..:.:.|:..||...|.|:  ||
Mosquito   208 GDEAPVRRISVRDLLPD-TEHYMTYEGSTTAPACYETVTWIVMNKPIYITKQQLHALRRLMQGGP 271

  Fly   317 D-GISPIARNSRPVQHMGNRVVSLN 340
            | ..:|:..|.||.|.:.:|.|..|
Mosquito   272 DHPKAPLGNNFRPPQPLLHRPVRTN 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 73/277 (26%)
CARPBXP_061519282.1 None

Return to query results.
Submit another query.