DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and LOC1271844

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_061501997.1 Gene:LOC1271844 / 1271844 VectorBaseID:AGAMI1_004713 Length:291 Species:Anopheles gambiae


Alignment Length:278 Identity:69/278 - (24%)
Similarity:109/278 - (39%) Gaps:82/278 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 QSPVNIDESQIQRMAIRELLSW-NHYDDLPASITLENTGQTLILRAQFHGNAP------------ 163
            ||||.:.:.:.:.:.....|.: .|:|.| ...||.|.||:.::..:...::|            
Mosquito    11 QSPVCLVQGRARIVDDAAPLHYVGHWDGL-GRATLSNNGQSAVVSFENPASSPSNPHLPPPFPAK 74

  Fly   164 -TIS---------GADLLASYTFLELRFHWGWCNSEGSEHTINHRKFPLEMQVMHKT-------- 210
             |:|         |..|.::|.|.:|.||||..::.||||.::.|...:|..::|..        
Mosquito    75 LTLSERPFRPFLVGGPLGSAYLFEQLHFHWGPDDAVGSEHLLDGRAHSMEAHLVHYNARYGSFGA 139

  Fly   211 ------------------GSGIPRTCTSSYDLLMIGYVFELSAHNPFLDPLVQNLRLVQKPGKRV 257
                              ||.:.|.                      |.|:|:.||.:::||.|.
Mosquito   140 ALAHPDGLAVVALWLDGGGSAVWRP----------------------LQPIVRALRHIRRPGTRT 182

  Fly   258 QISPFP-ISYLMYQFRSG--FYSYGGSLTHPPCYQGTEWFIFPESLAISDFQLRHFRLLL----- 314
            ...|.. :.:|......|  :|:|.||:|..|..:...|.|:...:.:|..|...||.||     
Mosquito   183 TALPADCLRWLAAGLELGRHYYTYDGSMTTAPYRECVRWLIYRTPVYVSPRQTAAFRRLLRRCPA 247

  Fly   315 --GPDGISPIARNSRPVQ 330
              |.|..:||..|.||||
Mosquito   248 RPGGDRFAPITSNFRPVQ 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 69/278 (25%)
LOC1271844XP_061501997.1 None

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