DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and Car4

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_031633.1 Gene:Car4 / 12351 MGIID:1096574 Length:305 Species:Mus musculus


Alignment Length:265 Identity:70/265 - (26%)
Similarity:106/265 - (40%) Gaps:44/265 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 GPHTWLPKSRSSSSSVEEATFFQSPVNIDESQIQ---RMAIRELLSWNHYDDLPASITLENTGQT 151
            ||..|....:.:.         |||:||..::.:   |:....|:.::.....|..........|
Mouse    37 GPEKWPGACKENQ---------QSPINIVTARTKVNPRLTPFILVGYDQKQQWPIKNNQHTVEMT 92

  Fly   152 LILRAQFHGNAPTISGADLLASYTFLELRFHWGWCNSEGSEHTINHRKFPLEMQVMHKTGSGIPR 216
            |       |....|.|.||.|.|..::|..||...|..||||:|:.|.|.:||.::||       
Mouse    93 L-------GGGACIIGGDLPARYEAVQLHLHWSNGNDNGSEHSIDGRHFAMEMHIVHK------- 143

  Fly   217 TCTSSYD-----LLMIGYVFELSAH-NPFLDPLVQNLRLVQKPGKRVQI------SPFPISYLMY 269
            ..|||.:     ..::.::.|:... |....|||:.|..:.||.....:      ...|.|..||
Mouse   144 KLTSSKEDSKDKFAVLAFMIEVGDKVNKGFQPLVEALPSISKPHSTSTVRESSLQDMLPPSTKMY 208

  Fly   270 QFRSGFYSYGGSLTHPPCYQGTEWFIFPESLAISDFQLRHF--RLLLGPDGISPIARNSRPVQHM 332
            .    ::.|.||||.|.|.:...|.::.:.:.|...|...|  .|....|....:..|.||:|.:
Mouse   209 T----YFRYNGSLTTPNCDETVIWTVYKQPIKIHKNQFLEFSKNLYYDEDQKLNMKDNVRPLQPL 269

  Fly   333 GNRVV 337
            |.|.|
Mouse   270 GKRQV 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 70/265 (26%)
Car4NP_031633.1 alpha_CA_IV_XV_like 48..276 CDD:239391 67/254 (26%)

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