DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and Car3

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_031632.2 Gene:Car3 / 12350 MGIID:88270 Length:260 Species:Mus musculus


Alignment Length:278 Identity:67/278 - (24%)
Similarity:109/278 - (39%) Gaps:44/278 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 APVYGYDMQHGPHTW---LPKSRSSSSSVEEATFFQSPVNIDESQIQRMAIRELLSWNHYDDLPA 141
            |..:||...:||..|   .|.::..:         |||:.:....|:...  .|..|:...|..:
Mouse     2 AKEWGYASHNGPDHWHELYPIAKGDN---------QSPIELHTKDIKHDP--SLQPWSASYDPGS 55

  Fly   142 SITLENTGQTLILRAQFHG--NAPTISGADLLASYTFLELRFHWGWCNSEGSEHTINHRKFPLEM 204
            :.|:.|.|:|  .|..|..  :...:.|..|...|...:...|||..:..|||||::..|:..|:
Mouse    56 AKTILNNGKT--CRVVFDDTYDRSMLRGGPLSGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAEL 118

  Fly   205 QVMH------------KTGSGIPRTCTSSYDLLMIGYVFELSAHNPFLDPLVQNLRLVQKPGKRV 257
            .::|            |...||          .::|...::.........|:..|..::..||..
Mouse   119 HLVHWNPKYNTFGEALKQPDGI----------AVVGIFLKIGREKGEFQILLDALDKIKTKGKEA 173

  Fly   258 QISPFPISYLMYQFRSGFYSYGGSLTHPPCYQGTEWFIFPESLAISDFQLRHFRLLLGP---DGI 319
            ..:.|..|.|....|. :::|.||.|.|||.:...|.:..|.:.:|..|:...|.|...   :..
Mouse   174 PFTHFDPSCLFPACRD-YWTYHGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLFSSAENEPP 237

  Fly   320 SPIARNSRPVQHMGNRVV 337
            .|:..|.||.|.:..|||
Mouse   238 VPLVGNWRPPQPVKGRVV 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 64/268 (24%)
Car3NP_031632.2 alpha_CA_I_II_III_XIII 1..259 CDD:239393 67/278 (24%)
Involved in proton transfer. /evidence=ECO:0000250|UniProtKB:P07451 64..67 1/4 (25%)

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