DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH13 and ca11

DIOPT Version :10

Sequence 1:NP_610602.2 Gene:CAH13 / 36126 FlyBaseID:FBgn0033542 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_002938168.2 Gene:ca11 / 100493884 XenbaseID:XB-GENE-6037596 Length:330 Species:Xenopus tropicalis


Alignment Length:323 Identity:86/323 - (26%)
Similarity:128/323 - (39%) Gaps:71/323 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 IYQRVLLL-----IRTPLQFGNTSCSRNSAPVYGYDMQHGPHTWLPKSRSSSSSVEEATFF---- 111
            :::.||:|     |.|..||         :|...|:     ..|..|.....|.|....|:    
 Frog     5 LWRSVLILQASAAIYTAAQF---------SPAKTYE-----EWWAYKEAVQGSFVPGPAFWGLVN 55

  Fly   112 -----------QSPVNIDESQIQRMAIRELLSWNHYDD-LP----------ASITLENTGQTLIL 154
                       |||:||:.|||            .:|. ||          .|.|:.|||:.:..
 Frog    56 SAWNLCTIGKRQSPININTSQI------------IFDPFLPPLRLSMTGTTVSGTMHNTGRHVSF 108

  Fly   155 RAQFHGNAPTISGADLLASYTFLELRFHWGWCNSEGSEHTINHRKFPLEMQVMHKTG---SGIPR 216
            |.. ......|||..||.::...|:..|:|..||.||||.:|......|:|::|...   |.:..
 Frog   109 RLD-KEQPVNISGGPLLYNHRLEEVMLHFGSENSIGSEHLMNKETSAGEVQLIHYNQDLYSNVTE 172

  Fly   217 TCTSSYDLLMIGYVFELSAH-NPFLDPLV--QNLRLVQKPGKRVQISPFPISYLMYQFRSGFYSY 278
            ...:...|.:|.....::.: |.||:.::  :.:..:....:...|....|..| |....||.:|
 Frog   173 ASRNPNGLAVISLFLNVADNSNSFLNRMLNRETITRISFRNEATYIQDLSIEDL-YPDTFGFLTY 236

  Fly   279 GGSLTHPPCYQGTEWFIFPESLAISDFQLRHFRLLL--GPDGI-SPIARNSRPVQ---HMGNR 335
            .||:|.||||:...|.:....|.|:..|:...|||.  .|..| ..::.|.||||   |.|.|
 Frog   237 QGSMTIPPCYETVTWIVIDRPLNITSMQMHSLRLLSQNQPSQIFQSMSDNFRPVQPLFHRGLR 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH13NP_610602.2 alpha_CARP_receptor_like 90..339 CDD:239396 77/284 (27%)
ca11XP_002938168.2 alpha_CARP_X_XI_like 47..303 CDD:239395 73/267 (27%)

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