DRSC/TRiP Functional Genomics Resources

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Protein Alignment stan and kug

DIOPT Version :9

Sequence 1:NP_001260871.1 Gene:stan / 36125 FlyBaseID:FBgn0024836 Length:3648 Species:Drosophila melanogaster
Sequence 2:NP_001027138.2 Gene:kug / 40191 FlyBaseID:FBgn0261574 Length:4699 Species:Drosophila melanogaster


Alignment Length:3006 Identity:668/3006 - (22%)
Similarity:1084/3006 - (36%) Gaps:912/3006 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 YLIIVHEDTPPGTVIFNASVYKLGS----ERHYKINAHKSANFVHHLVSVNHKDGQIQLRKALKC 90
            |...|..|.|.||:|.......|.|    |..|::   |..|  ..|..::.|.|::.:::.::.
  Fly  2145 YYATVSIDDPKGTIIMQVKAIDLDSAENGEVRYEL---KKGN--GELFKLDRKSGELSIKQHVEG 2204

  Fly    91 DGIYYPNLFTFY---VDSTSN----RLRSIDYYSLPV--RIFVSGHSCNEDRRIEQELHHHHYEE 146
            ....|......|   :...|:    :::.|| .|:||  :.|.: .|..||..:...| ....|.
  Fly  2205 HNRNYELTVAAYDGAITPCSSEAPLQVKVID-RSMPVFEKQFYT-VSVKEDVEMYSAL-SVSIEA 2266

  Fly   147 EDNTGYSKRRRRRSTQEMIQLNGNQLEEVFRQNSTEFRAGDLIFGDSFDNEMRHRILSR--KRRA 209
            |...|       ||....|.......|       .::..|.:...:..|.|   :|.|.  ..||
  Fly  2267 ESPLG-------RSLIYTISSESQSFE-------IDYNTGSIFVVNELDYE---KISSHDVSIRA 2314

  Fly   210 VGSPDPLHLQPALHRRISDAKQWI----SETY-------ASYA-----IHTTDKWNQICLRRSQF 258
            ..|...::.:..|...|.|.....    |:.|       ||:.     |:.||..:....:.|.:
  Fly  2315 TDSLSGVYAEVVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILKINATDNDSGANAKLSYY 2379

  Fly   259 INSLNAFLPRSVCQHCKVSFLDVND-----------ERFAIEH---------------QSRDLVA 297
            |.|:|.      ..:.::.::||.|           |:....|               :|...:.
  Fly  2380 IESING------QNNSELFYIDVTDGNLYLKTPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFIT 2438

  Fly   298 SRDV-----CIAESMW--KVSITFNIR--------CDRRDIVDSDH-RLKIVYHHQ--------- 337
            .:|:     |..|..:  |||:. .:|        ...:||.|:|. ..||||.::         
  Fly  2439 VKDLNDNAPCFVEPSYFTKVSVA-AVRGQFVALPKAYDKDISDTDSLEYKIVYGNELQTYSIDKL 2502

  Fly   338 --------EFNDTDIA----------------RRVRRELRNQ---SPYFEQALYVASVLEEQPAG 375
                    ..|.||.:                .|::..|..:   ||.|:|:.|.|.|.|....|
  Fly  2503 TGVISLQNMLNFTDKSSTVLNISVSDGVHTAYARLKISLLPENVYSPLFDQSTYEAQVPENLLHG 2567

  Fly   376 AAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDS 440
            ..:.||:|.|.:..........::....:.:|.:|..|||:|:..:.|||..|.:...:..:|..
  Fly  2568 HNIITVKASDGDFGTYANLYYEIVSEEMKKIFLIDQTTGVITSKVTFDREKKDEYVVLLKVSDGG 2632

  Fly   441 FPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-- 503
              .:.|..:|:|.|:|.||:.|.|..::::..:........|::|::|.|.||..|..:.:.|  
  Fly  2633 --GKFGFASLKVIVVDVNDNVPYFLLKEYKMVVSTTVEANQTILTVKAKDDDIVDNGSVHFQIVQ 2695

  Fly   504 ----EAVTD--------------------GAGLAQ--------------------------DQEM 518
                :||.|                    |....|                          |..:
  Fly  2696 KSNDKAVKDVIEINEKTGDIVFKSKAESYGVNSYQFFVRASDRGEPQFHSEVPVSIEIIETDANI 2760

  Fly   519 PIFR----------------------------------------IDSRSGVISTRSSLDRETSDS 543
            |.|.                                        :.|.||.:..:.:||||..:|
  Fly  2761 PTFEKSSVLLKIIESTPPGTVLTKLHMIGNYTFKFSIAADQDHFMISDSGELILQQTLDREQQES 2825

  Fly   544 YHLLVTAADLASAQSERRT-----ATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTV 603
            ::|:|.|        |..|     |.|.|.:.|.|:|||||:|....|:..|.|:   ..:..::
  Fly  2826 HNLIVVA--------ETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVAEN---SEKVISL 2879

  Fly   604 AHIRATDADQGNNAAIRYAIIGG--NTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGS 666
            ..:.|||||.|.|..|||.:...  |.|:.|.||..||.::|:..||.|....|...:.|.|.|.
  Fly  2880 VKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVIAADNGH 2944

  Fly   667 PSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-------------- 717
            |.......:.:.::|.|||||.|.......||.||...|..:|.:...|.|              
  Fly  2945 PKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENALPGTVLINLLLIDPDIEKQEMDFFIVSGD 3009

  Fly   718 ----------------------------------EG---ANAEITYSISERDDNFPLAVDPR--- 742
                                              :|   |.|.:...:.:.:||.|..:.||   
  Fly  3010 KQAQFQIGKSGELFIAKPLDREQLMFYNLSIIATDGKFTAKANVEIDVKDINDNTPYCLKPRYHI 3074

  Fly   743 -------------------------------------------TGWVQTIKPLDREEQGRFAFQV 764
                                                       :|.::....||||...::....
  Fly  3075 STNESISIGTTLVEVKAIDFDFQSKLRFYLSGKGADDFSIGKESGILKVASALDRETTPKYKLVA 3139

  Fly   765 VAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRL 827
            ..:||....:...|.::|||.|:|||.|.|:...|..:|.||....|.:|.|.|.|.|  .:.::
  Fly  3140 HVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDFGVNRQI 3204

  Fly   828 HYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDA 890
            .|.: .|.....|.|:...  |:|.:.:|||.:....|.|||.|.|.|  .....|||.:||.|.
  Fly  3205 KYSL-MGENHDYFKISKST--GIIRLHKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDI 3266

  Fly   891 NNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITY---SLNEESINGLGSPDPFSI 952
            |:..|.|....||..:.|:|..||.|..|.||..|:||||.|.|   |.||:.        .|.:
  Fly  3267 NDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQG--------KFKM 3323

  Fly   953 NPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASIL 1017
            :..||.:|.||.||.|.:..|.||:.|.|||.|.||:...|.|.:.|:|||:|.|...||:.::.
  Fly  3324 DSTTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPTFLQNLYRINVN 3388

  Fly  1018 EDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLT 1082
            ||..||:.::.|.|:|.|..:||.:.|.: :|....|.|.|||.:|||..::.||||:::.:.|.
  Fly  3389 EDIFVGSKILDVKATDEDSDVNGLVTYNI-ERGDNIGQFSIDPKNGTISVSRPLDRETISHYTLE 3452

  Fly  1083 AIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAV 1147
            ..|.|:|.|...::|.:.|.:.|.||:.|.|:|...::.:.||..:|.|.......|.||..|..
  Fly  3453 IQACDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQENRLLGYVFLTFKISDADETPNTT 3517

  Fly  1148 VH-YSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVRA---ASPPLRNDAHIEI 1208
            .: :.|..|::...|.|     .:...|.|.:..:: :.:..|.:.||.   .:|||.:||.:.:
  Fly  3518 PYTFDIRSGNEGGLFRL-----EQDGSLRTASRFNH-NLQDEFVIQVRVFDNGTPPLYSDAWVVV 3576

  Fly  1209 LVTDVNDNAPVLRDFQVIFNNFRDHFPSGEIGRIPAFDADVSDKLHYRILSG-----NNANLLRL 1268
            .:.:.:...|::...:|..|:|.|.|....||::.|.|.|..|:|::.::||     .::.|..:
  Fly  3577 KIIEESQYPPIVTPLEVTINSFEDDFSGAFIGKVHASDQDKYDELNFSLVSGPDDMYQSSKLFNI 3641

  Fly  1269 NSSSGGLVLSPQLNTNVPKFATMEVSVSDGINEAKAIMQLSVRLITEDMLFNSVTVRLNEMTEEA 1333
            ::::|.:.....|:..:.|   :.||||||.....:|::::|.|:|.|||..||.:|...::...
  Fly  3642 SNNTGKIYAISNLDIGLYK---LNVSVSDGKFHVFSIVKINVELVTNDMLKESVVIRFRRISASE 3703

  Fly  1334 FLSPLLNFFLDGLAAIIPCPKEHIFVFSIQDDTDVSSR-------------ILNVSFSARRPDV- 1384
            ||......|:..:..|:.|.::.:.:.::|.|...:|:             .|||.|:.|:..: 
  Fly  3704 FLLSHRKTFMRSIRNIMRCRQKDVILITLQSDYQKASQHAVGNRRARSIDSDLNVVFAVRKQQII 3768

  Fly  1385 -SHEEFYTPQYLQERVYLNRAIL---ARLATVEVLP----FDDNLCVREPCLNFEECLTVLKFGN 1441
             ..:||:|...:::.:...:..:   ..|...:|||    .:.|.||...|   ::.|.:||...
  Fly  3769 PDSDEFFTSDEIRQTLIDKKNEIENETNLVVEDVLPSTCQSNKNDCVHGEC---KQILQILKNNV 3830

  Fly  1442 ASEFIHSDTVLF-RPIY-PVNTFACSCPEGFTGSKEHYLCDTEVDLCYSDPCQNGGTCVRREG-- 1502
            .:.|  :|.:.| .|.| ||||  |.|..||.|  :|  |...|:.|.:|||.....|:....  
  Fly  3831 TTTF--TDVISFAAPSYIPVNT--CVCRPGFDG--KH--CKETVNACSTDPCSPQRICMPSGSAL 3887

  Fly  1503 GYTCVCPSTHTGQNCETGVGHLRPCPSETCEGGLSCLSNYPSSQPPPYTATCELRARAFGRNSFL 1567
            ||.||||...:|..||.   ....|.:|:|:.||             :||.      :||..|:.
  Fly  3888 GYQCVCPKGFSGTYCER---KSSKCSNESCDMGL-------------FTAV------SFGGKSYA 3930

  Fly  1568 TFESLKQRHRFNLK------LRFATVQENGLLLY-NGRYNELHDFIALEIHEGHVSFSFSLGDHS 1625
            .::..|.:.:|.|:      |:..|||:.|.||| :|:.    |:..|||..|.|.:.|.||. .
  Fly  3931 HYKINKVKAKFTLENGFSYSLQIRTVQQTGTLLYASGKV----DYNILEIINGAVQYRFDLGS-G 3990

  Fly  1626 ERISVIQEAKVSDGKWHQVEVVYLNRSVTLVLDN----CDTAIALSGQLGDRWSCANRTTLKLDK 1686
            |.:..:....:|||:|||:.:.....|..:::||    ..:|..::|.|..:.:           
  Fly  3991 EGVISVSSINISDGEWHQISLERSLNSAKVMVDNKHVSHGSAPGVNGILNIQSN----------- 4044

  Fly  1687 RCSLLTETCHRFLDLTGPLQVGGLPRIPAHFPVTNRDFVGCISDLRIDDRFVDLNSYVADNGTLA 1751
                         |:....:|...|.|..:..: .|.|:||:::::|....:.|  |::...|:|
  Fly  4045 -------------DIFVGAEVRPHPSIIGYEDI-QRGFIGCMANIKIAKESLPL--YISGGSTIA 4093

  Fly  1752 GCPQ---------------KAPLCQSEPCFNGGTCRE-GWGTYSCECPEGYAGNSCQDNI----P 1796
            ...:               :..:|.|:||.|.|.|:| ....:.|.|...|:|..|:.::    .
  Fly  4094 ALKRFTNVEFKCDPSNVLVRLGICGSQPCANSGICKELDTDVFECACQPRYSGKHCEIDLDPCSS 4158

  Fly  1797 APWRFSGDGSLSFNPLLRPIQLPWTTSFSLRTRQKEAFLLQIQIGQNSSAAVCLRQGVLYYIFDG 1861
            .|..|.|.....                                |.|:.:..|            
  Fly  4159 GPCLFGGRCDYH--------------------------------GPNNYSCTC------------ 4179

  Fly  1862 EPMYLAGAFLSDGEWHRVEIRWQQGSEIHFSVDYGQRSGSVPMSQKVQGLYVGKIVMGSPDGSIG 1926
             |::|:|                                                          
  Fly  4180 -PIHLSG---------------------------------------------------------- 4185

  Fly  1927 AVPEASPFEGCIQDVRIGAGQSVLSRPTIRENVEDGCESRAQC-PDHCPNHSSCQSSWDLSTCEC 1990
                                              ..||....| |:.|.|...|:....:|.|.|
  Fly  4186 ----------------------------------KRCEYGKFCTPNPCKNGGICEEGDGISHCMC 4216

  Fly  1991 DSGYVGTDC---APICTVRPCASGVCRANTSLPRGYDCECNSSSRHGDYCEKELQ---------- 2042
             .||.|..|   ...|..:||.:|....|.  |..:.|.| .|...|..|...|.          
  Fly  4217 -RGYTGPTCEIDVDECENQPCGNGATCINE--PGSFRCIC-PSYLTGASCGDPLYSNSISTKLKN 4277

  Fly  2043 ---QPCPGGWWGERV------CGPCRCDLAQG--------YHPDCNKTTGQCYCKTNHYQPPNET 2090
               :...|...|..|      |..|...|.:.        ...|.||::         |:..|..
  Fly  4278 FSIEHISGIISGVAVVLVIISCVLCCVVLKRSSSSKRRNRLEKDKNKSS---------YKEANLN 4333

  Fly  2091 ACLSCDCYSIGSFSGACNPLTGQCECREGVIGRRCDSCSNPYAEVTLSGCEV-----VYDACP-- 2148
            :.:..|.|        |.|                        .|.||..||     .|.|.|  
  Fly  4334 SLVDKDNY--------CKP------------------------NVKLSNLEVNQRPISYTAVPND 4366

  Fly  2149 ------RSFAGGVWWPRT-PLGGVAIEGCPPPARGKGQRSCDVQSGSWNTPDMYNCTSEPFVELR 2206
                  |:|...:...|: ...|..:|..|...:...:....|...|.::.|..|...:.:.|  
  Fly  4367 NLVLSNRNFVNNLDILRSYGSAGDELENVPFEYQKVNRNKQHVNINSCHSTDADNAYKQEWCE-- 4429

  Fly  2207 RQLSQLEKLELELNSFVAIKMAEQLRKAC-EAVDRRGASKDQKISGNGRPNRRYKMESSFL---- 2266
                     ::.|.:|...|:..:|::.. .:|.|....|..::.   .||..:...::|:    
  Fly  4430 ---------QMHLRTFSENKLNNELKRDFGPSVSRFSTGKLIQVE---MPNVCHSSSANFVDYSA 4482

  Fly  2267 LSNGGNVWSHELEMDYLSDELKFTHDRLYGADLLVTEGLLQELINYELMQSGLNLSHSQDKYFIK 2331
            |:||...|.       .||.::.:|:.|  .|:....|                          .
  Fly  4483 LANGQYHWD-------CSDWVRKSHNPL--PDITEVPG--------------------------A 4512

  Fly  2332 NLVDAASVILDRKYEAEWRRATELIQRGPDDLVDAFNKYLVVLARSQHDTYTSPFEIVQPNMALG 2396
            .:.|::|:..:...|::.::|. .:.|...|                          |.|..   
  Fly  4513 EIADSSSLHSNDSNESKSKKAF-FVHREDGD--------------------------VDPTR--- 4547

  Fly  2397 LDIVTTESLFGYEPEQLSEYHRSKYLKPNAFTTESVVLPDTSGFLQHSARQRPVISFPKYNNYIL 2461
             ||..           |:|...|:||...|   ||.:.|    |:...:..:|:.....:||  :
  Fly  4548 -DIAA-----------LNEDIGSEYLDSEA---ESCLEP----FMLPRSSNQPLSRLSSFNN--I 4591

  Fly  2462 DRRKFDQHTKVLVPLEMLGITPPESDEISQSGRRGSSHDHRAIVAYAQYKDVGQLLPDLYDETIT 2526
            :...:..:|   |||         ..::|.|.:           .|.::       ||.|     
  Fly  4592 ENEDYKSNT---VPL---------PSKVSHSCK-----------VYLRH-------PDSY----- 4621

  Fly  2527 RRWGVDVELATPILSLQILVPSMEREQET-----------QRLEIPSRKIFSSSS------PSSS 2574
                               :|:|....||           .|:||.:|:..|.:|      |.:.
  Fly  4622 -------------------LPTMHFPSETDGESSMTEGPISRMEIKTRRTISENSEEAYLFPCTV 4667

  Fly  2575 SSSGSTEQQFVEVFDV 2590
            ...||.....|.:.::
  Fly  4668 GEIGSNSNISVRLCEI 4683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stanNP_001260871.1 Cadherin_repeat 364..460 CDD:206637 26/95 (27%)
Cadherin_repeat 468..577 CDD:206637 35/205 (17%)
Cadherin_repeat 585..685 CDD:206637 31/101 (31%)
Cadherin_repeat 693..790 CDD:206637 29/193 (15%)
Cadherin_repeat 799..891 CDD:206637 32/95 (34%)
Cadherin_repeat 901..1003 CDD:206637 43/104 (41%)
Cadherin_repeat 1012..1108 CDD:206637 33/95 (35%)
Cadherin_repeat 1118..1216 CDD:206637 22/101 (22%)
Cadherin_repeat 1235..1313 CDD:206637 21/82 (26%)
EGF_CA 1483..1518 CDD:238011 13/36 (36%)
LamG 1558..1734 CDD:238058 45/186 (24%)
EGF 1760..1789 CDD:278437 11/29 (38%)
Laminin_G_2 1826..1944 CDD:280389 6/117 (5%)
TNFRSF <1963..2061 CDD:304602 31/120 (26%)
EGF_Lam 2095..2140 CDD:214543 7/44 (16%)
HRM 2144..2200 CDD:280888 13/64 (20%)
GAIN 2293..2458 CDD:293098 24/164 (15%)
GPS 2743..2802 CDD:295363
7tm_4 2809..3028 CDD:304433
kugNP_001027138.2 Cadherin_repeat 66..178 CDD:206637
Cadherin_repeat 187..285 CDD:206637
E_set 309..390 CDD:298831
Cadherin_repeat 404..503 CDD:206637
Cadherin_repeat 513..609 CDD:206637
Cadherin_repeat 622..708 CDD:206637
Cadherin_repeat 776..873 CDD:206637
Cadherin_repeat 883..976 CDD:206637
Cadherin_repeat 984..1082 CDD:206637
Cadherin_repeat 1092..1189 CDD:206637
Cadherin_repeat 1197..1295 CDD:206637
Cadherin_repeat 1303..1386 CDD:206637
Cadherin_repeat 1413..1502 CDD:206637
Cadherin_repeat 1510..1608 CDD:206637
Cadherin_repeat 1621..1713 CDD:206637
Cadherin_repeat 1724..1811 CDD:206637
Cadherin_repeat 1819..1927 CDD:206637
Cadherin_repeat 1948..2030 CDD:206637
Cadherin_repeat 2037..2136 CDD:206637
Cadherin_repeat 2144..2235 CDD:206637 19/94 (20%)
Cadherin_repeat 2246..2336 CDD:206637 22/108 (20%)
Cadherin_repeat 2345..2445 CDD:206637 17/105 (16%)
Cadherin_repeat 2453..2545 CDD:206637 17/92 (18%)
Cadherin_repeat 2555..>2633 CDD:206637 20/79 (25%)
Cadherin_repeat 2658..2759 CDD:206637 14/100 (14%)
Cadherin_repeat 2774..2856 CDD:206637 19/89 (21%)
Cadherin_repeat 2865..2963 CDD:206637 31/100 (31%)
Cadherin_repeat 2974..3063 CDD:206637 11/88 (13%)
Cadherin_repeat 3072..3165 CDD:206637 13/92 (14%)
Cadherin_repeat 3173..3269 CDD:206637 33/98 (34%)
Cadherin_repeat 3277..3374 CDD:206637 43/104 (41%)
Cadherin_repeat 3383..3479 CDD:206637 34/96 (35%)
Cadherin_repeat 3488..3579 CDD:206637 22/96 (23%)
Cadherin_repeat 3590..3681 CDD:206637 25/93 (27%)
EGF_CA 3866..3903 CDD:238011 13/36 (36%)
Laminin_G_2 3953..4077 CDD:280389 38/153 (25%)
EGF_CA <4121..4150 CDD:238011 10/28 (36%)
EGF_CA 4152..4189 CDD:238011 9/173 (5%)
EGF_CA 4195..4225 CDD:238011 10/30 (33%)
EGF_CA 4227..4262 CDD:214542 10/37 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462298
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24026
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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