Sequence 1: | NP_001260871.1 | Gene: | stan / 36125 | FlyBaseID: | FBgn0024836 | Length: | 3648 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476722.1 | Gene: | shg / 37386 | FlyBaseID: | FBgn0003391 | Length: | 1507 | Species: | Drosophila melanogaster |
Alignment Length: | 1481 | Identity: | 363/1481 - (24%) |
---|---|---|---|
Similarity: | 614/1481 - (41%) | Gaps: | 312/1481 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 354 NQSPYFEQ-ALYVASVLEEQPAGAAVTTVRARDPEDSPVV-YSMVSLLDSRSQSLFKVDSRTGVV 416
Fly 417 TTSASLDRELMDVH----YFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGA 477
Fly 478 TVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSD 542
Fly 543 SYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYT-VQVPEDQWGGTEDNTVAHI 606
Fly 607 RATDADQGNNAAIRYAIIGG-----NTQSQFSIDSMSGDV--SLVKPLDYESVRSYRLVIRAQDG 664
Fly 665 GSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSD-EGANAEITYSI 728
Fly 729 SERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPA 793
Fly 794 FNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLD 858
Fly 859 YKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSAS-VFEDAPVGTTVLVVSAT 922
Fly 923 DSDVGVNA-QITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPS 986
Fly 987 LSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDI 1051
Fly 1052 EDGS-FVIDPTSGTIRTNKGLDRE--------SVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVN 1107
Fly 1108 DSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAF-SLVTRPGSER 1171
Fly 1172 AQLLTMTELDYESTRKRFELVVRAASPPLRNDAHIEIL---VTDVNDNAPVLRDFQVIFNNFRDH 1233
Fly 1234 FPSGEIGRI---PAFDADVSDK-LHYRILSGNNANLLRLNSSSGGLVLSPQLNTNVPKFATMEVS 1294
Fly 1295 VSDGI----NEAKAIMQLSVRLITEDMLFNSVTVRLNEMTEEAFLSPLLNF-------FLD---- 1344
Fly 1345 GLAAIIPCPKEHIFVFSIQDDTDVSSRILNVSFSARRPDVSHEEFYTPQYLQERVYLNRAILARL 1409
Fly 1410 ATVEVLPFDDNLCVREPCLNFEECLTVLKFGNASEFIHSDTVLFRPIYPVNTFA---CSCPEGFT 1471
Fly 1472 GSKEHYLCDTEVDLCYSDPCQNGGTCVRREGGYTCVCPSTHTGQNCETGVGHLRPCPSETCEGGL 1536
Fly 1537 SCLSNYPSSQPPPYTATCELRARAFGRNSFLTFESLKQRHRFNLKLRFATVQENGLLLYNGRYN- 1600
Fly 1601 ----ELHDFIALEIHEGHVSFSFSLGDHSERISVIQEAKVSDGKWHQVEVVYLNRSVTLVLDNC- 1660
Fly 1661 -DTAIALSGQLGDRWSCANRTTLKLDKRCSLLTETCHRFLDLTGPLQVGGLP------------- 1711
Fly 1712 RIPAHFPVTNRDFVGCISDLRIDDRFVDLNSYVADNGTLAGCPQKAPLCQS 1762 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
stan | NP_001260871.1 | Cadherin_repeat | 364..460 | CDD:206637 | 35/100 (35%) |
Cadherin_repeat | 468..577 | CDD:206637 | 27/108 (25%) | ||
Cadherin_repeat | 585..685 | CDD:206637 | 23/107 (21%) | ||
Cadherin_repeat | 693..790 | CDD:206637 | 22/97 (23%) | ||
Cadherin_repeat | 799..891 | CDD:206637 | 7/91 (8%) | ||
Cadherin_repeat | 901..1003 | CDD:206637 | 41/103 (40%) | ||
Cadherin_repeat | 1012..1108 | CDD:206637 | 28/104 (27%) | ||
Cadherin_repeat | 1118..1216 | CDD:206637 | 25/101 (25%) | ||
Cadherin_repeat | 1235..1313 | CDD:206637 | 20/85 (24%) | ||
EGF_CA | 1483..1518 | CDD:238011 | 8/34 (24%) | ||
LamG | 1558..1734 | CDD:238058 | 42/195 (22%) | ||
EGF | 1760..1789 | CDD:278437 | 1/3 (33%) | ||
Laminin_G_2 | 1826..1944 | CDD:280389 | |||
TNFRSF | <1963..2061 | CDD:304602 | |||
EGF_Lam | 2095..2140 | CDD:214543 | |||
HRM | 2144..2200 | CDD:280888 | |||
GAIN | 2293..2458 | CDD:293098 | |||
GPS | 2743..2802 | CDD:295363 | |||
7tm_4 | 2809..3028 | CDD:304433 | |||
shg | NP_476722.1 | Cadherin_repeat | 93..191 | CDD:206637 | 35/100 (35%) |
Cadherin_repeat | 200..292 | CDD:206637 | 26/102 (25%) | ||
CA | 332..410 | CDD:214520 | 19/79 (24%) | ||
Cadherin_repeat | 417..518 | CDD:206637 | 33/198 (17%) | ||
Cadherin_repeat | 531..619 | CDD:206637 | 39/98 (40%) | ||
Cadherin_repeat | 627..729 | CDD:206637 | 29/105 (28%) | ||
Cadherin_repeat | 736..834 | CDD:206637 | 25/102 (25%) | ||
LamG | 1127..1294 | CDD:238058 | 42/195 (22%) | ||
Cadherin_C | 1358..1489 | CDD:279398 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 53 | 1.000 | Domainoid score | I7599 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24026 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |