DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elp2 and ELP2

DIOPT Version :9

Sequence 1:NP_610600.1 Gene:Elp2 / 36123 FlyBaseID:FBgn0033540 Length:794 Species:Drosophila melanogaster
Sequence 2:NP_001229804.1 Gene:ELP2 / 55250 HGNCID:18248 Length:891 Species:Homo sapiens


Alignment Length:908 Identity:353/908 - (38%)
Similarity:509/908 - (56%) Gaps:146/908 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VENLHTSVACNRCTECADW--GPNGWIAYGACNAIAIMDPKFQGNSAKVLFTLVEHTKRVNTVRW 65
            :|..|.....||.....:|  ||.|.:|:|...::.:.||.    ...|:..|..||.|||.::|
Human     6 LETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPL----KRVVVTNLNGHTARVNCIQW 66

  Fly    66 LDC-------DKLLSGGDDAIAILWELDETGTTKSFTLKGHTSGVNTVDGIRQQDGS-----WLL 118
            : |       .:|:|||.|...|.||:::....|:..|:||...|..|..:.|:..|     .|:
Human    67 I-CKQDGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRRTSDPALCTLI 130

  Fly   119 ATAAADTTIKLWTFQDNNYVCFQTISLSDGFCFCLRLQLLP------KSNQV------------L 165
            .:||||:.::||:.:....:|.||::..:||...|.|..||      |:.||            .
Human   131 VSAAADSAVRLWSKKGPEVMCLQTLNFGNGFALALCLSFLPNTDVTWKTGQVERGRAWKPPASLA 195

  Fly   166 LAFSGDDETVS---------LWSEQVET---------------------AGEGD-------SLGR 193
            |.....|..||         ||.|::.|                     .|..|       ....
Human   196 LCSRSCDSMVSCYASILCKALWKEKLHTFWHHNRISFLPSAFRPIPILACGNDDCRIHIFAQQND 260

  Fly   194 QFQRKHKLTGHEDWVRGLDFVVDGEDLLLASGSQDNFIRLWRIAPRSKEQMQENRVDLHQLSHND 258
            |||:...|.|||||:||:::...|.||.|||.|||..||:|::..:|....          :.:|
Human   261 QFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWKLYIKSTSLE----------TQDD 315

  Fly   259 DEIKVEEKILQLGKEA---WYAVSLESVLYGHEGWIYGVHWHK------TPDQELRLLSASIDKT 314
            |.|:::|....:..|:   .:||:||:||.|||.|:..|||..      ...|.:||||||:|||
Human   316 DNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGVLQQPVRLLSASMDKT 380

  Fly   315 VIIWAPTEE-GIWLEEVRVGEVGGNSVGFYGGKFSGDGHSIMAHSYQGGFHIWSQDPDRPQLWTP 378
            :|:|||.|| |:|||:|||||||||::|||..:|:.||..|:||::.|..|:|.|:...|:.|||
Human   381 MILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHAFHGALHLWKQNTVNPREWTP 445

  Fly   379 GVIVGGHYGEVRDLAWEHSGAYLMTASADQTTRLHAPW-LQDGANPTWHELARPQIHGYDMQALA 442
            .:::.||:..|:||.|:..|.:::|...||||||.||| .:|.:..||||:|||||||||::.||
Human   446 EIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLA 510

  Fly   443 LLSRYKFASGAEEKIVRTFQAPANFIENFRHISG------IENDDAGDVLLDSLPKGASVPSLGL 501
            :::|::|.|||:||::|.|.||.||:|||..|:|      :.|.|:      .||:||:||:|||
Human   511 MINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQSLNHVLCNQDS------DLPEGATVPALGL 569

  Fly   502 SNKAVYKVD-----SEVESTSKTSKDEYPDNYFVPIALETPPQEETLMQNTLWPELQKLYGHGYE 561
            |||||::.|     |:.|....::..||....|.|..|..||.|:.|:|||||||:|||||||||
Human   570 SNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQKLYGHGYE 634

  Fly   562 IFALAATADGSLLASTCKASNAEHAQIILWNPSNWKQIQKLSGHQLTVTQLSFSPDSRYLLSVSR 626
            ||.:...:..:||||.|||:..|||.|||||.::|||:|.|..|.|||||::|||:.::||:|||
Human   635 IFCVTCNSSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSR 699

  Fly   627 DRRWCLYERQDSSVS------YQLVASTDKSNGVHTRIIWSCDWSHDGQFFVTSSRDGKVVVW-- 683
            ||.|.|:::|| ::|      :.|.|.|:|...||:|||||||||.|.::|.|.|||.|||||  
Human   700 DRTWSLWKKQD-TISPEFEPVFSLFAFTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGE 763

  Fly   684 -KKEEDCKESSLNGWQANGVLELKNESITAVAFSNSYLSGTDDTYILALGTETGLIKIYQFVR-- 745
             ...:||.|.::.  ..:.||:: ..::|||  |...:......|::|:|.|.|.|.:|.:.:  
Human   764 CDSTDDCIEHNIG--PCSSVLDV-GGAVTAV--SVCPVLHPSQRYVVAVGLECGKICLYTWKKTD 823

  Fly   746 -----GAWKLLSDLNKSQAHHLTVRRLQFR--PGKQ----------LQLASCGEDHLVRIYDI 791
                 ..|....:.::||:|.|.:|:|.::  .||.          |..|||||||.|:|:.:
Human   824 QVPEINDWTHCVETSQSQSHTLAIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRV 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elp2NP_610600.1 WD40 <2..236 CDD:225201 89/301 (30%)
WD40 repeat 18..55 CDD:293791 10/38 (26%)
WD40 50..412 CDD:295369 153/438 (35%)
WD40 repeat 104..145 CDD:293791 13/45 (29%)
WD40 repeat 150..202 CDD:293791 20/106 (19%)
WD40 repeat 209..281 CDD:293791 22/74 (30%)
WD40 237..741 CDD:225201 244/534 (46%)
WD40 repeat 291..331 CDD:293791 23/46 (50%)
WD40 repeat 337..382 CDD:293791 19/44 (43%)
WD40 repeat 389..412 CDD:293791 10/22 (45%)
WD40 552..790 CDD:295369 113/265 (43%)
WD40 repeat 563..604 CDD:293791 21/40 (53%)
WD40 repeat 609..652 CDD:293791 22/48 (46%)
WD40 repeat 660..695 CDD:293791 20/37 (54%)
WD40 repeat 702..758 CDD:293791 14/62 (23%)
WD40 repeat 764..791 CDD:293791 14/38 (37%)
ELP2NP_001229804.1 WD40 <15..384 CDD:225201 117/383 (31%)
WD40 repeat 24..56 CDD:293791 10/35 (29%)
WD40 54..481 CDD:295369 155/437 (35%)
WD40 repeat 62..105 CDD:293791 13/43 (30%)
WD40 repeat 110..170 CDD:293791 18/59 (31%)
WD40 repeat 178..218 CDD:293791 8/39 (21%)
WD40 203..761 CDD:225201 258/574 (45%)
WD40 repeat 225..269 CDD:293791 5/43 (12%)
WD40 repeat 275..344 CDD:293791 24/78 (31%)
WD40 repeat 351..384 CDD:293791 14/32 (44%)
WD40 repeat 410..451 CDD:293791 15/40 (38%)
WD40 repeat 457..501 CDD:293791 22/43 (51%)
WD40 repeat 506..555 CDD:293791 21/48 (44%)
WD40 repeat 563..628 CDD:293791 30/64 (47%)
WD40 <624..883 CDD:295369 113/264 (43%)
WD40 repeat 635..677 CDD:293791 22/41 (54%)
WD40 repeat 738..769 CDD:293791 17/30 (57%)
WD40 repeat 778..839 CDD:293791 14/63 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141111
Domainoid 1 1.000 192 1.000 Domainoid score I3227
eggNOG 1 0.900 - - E1_KOG1063
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6019
Inparanoid 1 1.050 614 1.000 Inparanoid score I908
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55164
OrthoDB 1 1.010 - - D279631at33208
OrthoFinder 1 1.000 - - FOG0004188
OrthoInspector 1 1.000 - - oto90513
orthoMCL 1 0.900 - - OOG6_103229
Panther 1 1.100 - - LDO PTHR44111
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2935
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.770

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