DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Elp2 and Elp2

DIOPT Version :10

Sequence 1:NP_610600.1 Gene:Elp2 / 36123 FlyBaseID:FBgn0033540 Length:794 Species:Drosophila melanogaster
Sequence 2:XP_308870.5 Gene:Elp2 / 1270192 VectorBaseID:AGAMI1_003974 Length:794 Species:Anopheles gambiae


Alignment Length:811 Identity:428/811 - (52%)
Similarity:571/811 - (70%) Gaps:35/811 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQVENLHTSVACNRCTECADWGPNGWIAYGACNAIAIMDPKFQGNSAKVLFTLVEHTKRVNTVRW 65
            |.||.::||.||||..:..||||:|.|.:.|.||||:.|||:.| |.|::.||:.|..||||||.
Mosquito     1 MFVETIYTSAACNRTPDSLDWGPDGLIYFAANNAIAVFDPKYHG-SVKIVRTLIGHKARVNTVRV 64

  Fly    66 L----DCD---KLLSGGDDAIAILWELDETGTTKSFTLKGHTSGVNTVDG-IRQQDGSWLLATAA 122
            :    :|.   .||||.||...|||...:.|....|.|||||.||..||. :.....:.::||.:
Mosquito    65 VRDGSECHGGINLLSGSDDGTCILWNTKQDGGAVRFILKGHTKGVTAVDALVDTATNNLIVATGS 129

  Fly   123 ADTTIKLW-TFQDNNYVCFQTISLSDGFCFCLRLQLLPKSNQVLLAFSGDDETVSLWSEQVETAG 186
            .|::|||| ...::.:.|.|||.|..|..|.::|..||:||.|:||::.|.:.|.|...|..|  
Mosquito   130 VDSSIKLWQATAESTFECTQTIDLRSGLTFAMKLFCLPRSNAVMLAYTTDTDVVKLCVRQKRT-- 192

  Fly   187 EGDSLGRQFQRKHKLTGHEDWVRGLDFV--VDGEDLLLASGSQDNFIRLWRIAPRSKEQMQENRV 249
              |:....|:...:|.||.|||||||.:  .|.||.||||.|||.|||||||:||:..|.|:...
Mosquito   193 --DADEATFEPVEQLKGHCDWVRGLDCIQLPDSEDWLLASSSQDTFIRLWRISPRASLQKQKEFK 255

  Fly   250 DLHQLSHNDDEIKVEEKILQL----GKEAWYAVSLESVLYGHEGWIYGVHWHKTPDQELRLLSAS 310
            ::..    :::|.:||:...:    |....||:||||||.|||||:||||:... |.:|.|||:|
Mosquito   256 EILL----EEDITLEERTFTVRAADGAAYHYALSLESVLQGHEGWVYGVHFCMR-DGKLHLLSSS 315

  Fly   311 IDKTVIIWAPTEEGIWLEEVRVGEVGGNSVGFYGGKFSGDGHSIMAHSYQGGFHIWSQDPDRPQL 375
            |||::.:|.|:|.|:|:|.||||||||:|:||||||||.||.||:.|.:||.||:|.:|.::|.|
Mosquito   316 IDKSLTVWTPSESGVWVESVRVGEVGGSSLGFYGGKFSPDGSSIIGHGFQGSFHLWREDAEQPGL 380

  Fly   376 WTPGVIVGGHYGEVRDLAWEHSGA-YLMTASADQTTRLHAPWLQDGANPTWHELARPQIHGYDMQ 439
            |.||.|:|||:|.||||||:.:|. |::|.|||||||:||||.:.....|||||.|||:||||||
Mosquito   381 WKPGTILGGHFGGVRDLAWDPAGGMYVVTLSADQTTRIHAPWSRPEGEETWHELGRPQVHGYDMQ 445

  Fly   440 ALALLSRYKFASGAEEKIVRTFQAPANFIENFRHISGIENDDAGDVLLDSLPKGASVPSLGLSNK 504
            .|.|||||:.||.|||||:|.||||:||::|||.:.|:..|..||.:::|.|.||||||||||||
Mosquito   446 CLTLLSRYRLASAAEEKIIRIFQAPSNFVQNFRALCGVVTDPEGDAVVESNPMGASVPSLGLSNK 510

  Fly   505 AVYKVDSEVESTSKTSKDEYPDNYFVPIALETPPQEETLMQNTLWPELQKLYGHGYEIFALAATA 569
            ||::|::. |:.|:..||.||::||.|||||:||.||||||||||||:|||||||.|::|:.::.
Mosquito   511 AVFEVETP-ETDSRHIKDMYPEHYFSPIALESPPAEETLMQNTLWPEIQKLYGHGNELYAIVSSP 574

  Fly   570 DGSLLASTCKASNAEHAQIILWNPSNWKQIQKLSGHQLTVTQLSFSPDSRYLLSVSRDRRWCLYE 634
            ||:|:||.|:|::.:.|||:||:.::|:.:|:|:.||||||||:|:||.:|||||||||.:.::.
Mosquito   575 DGALIASGCRATSTDQAQILLWDTASWRVVQQLTAHQLTVTQLAFAPDGQYLLSVSRDRTFSVFR 639

  Fly   635 RQDSSVSYQLVASTDKSNGVHTRIIWSCDWSHDGQFFVTSSRDGKVVVWK-KEEDCKESSLNGWQ 698
            |..|  :::||..:||:.||||||||.||||||.:.|.|.|||||||.|| ..|:...:::..::
Mosquito   640 RVSS--AFELVMRSDKTKGVHTRIIWCCDWSHDSKRFATGSRDGKVVAWKASNEESNGAAVAPFE 702

  Fly   699 ANGVLELKNESITAVAFSNSYLSGTDDTYILALGTETGLIKIYQFVRGAWKLLSDLNKSQAHHLT 763
            ..|||||||||||||||....||  |..|::|:|.|:|:||:|..  |.|.||.::::..|||||
Mosquito   703 QAGVLELKNESITAVAFGRRKLS--DGRYLVAVGLESGVIKLYAL--GQWDLLLNISEDHAHHLT 763

  Fly   764 VRRLQFRPG-KQLQLASCGEDHLVRIYDIKL 793
            |:||.|||. :|.||||||||.|||:|.|||
Mosquito   764 VKRLSFRPHVEQHQLASCGEDGLVRVYSIKL 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Elp2NP_610600.1 WD40 repeat 18..55 CDD:293791 19/36 (53%)
WD40 50..412 CDD:475233 179/377 (47%)
WD40 repeat 104..145 CDD:293791 13/42 (31%)
WD40 repeat 150..202 CDD:293791 16/51 (31%)
WD40 repeat 209..281 CDD:293791 32/77 (42%)
WD40 repeat 291..331 CDD:293791 19/39 (49%)
WD40 repeat 337..382 CDD:293791 26/44 (59%)
WD40 repeat 389..412 CDD:293791 15/23 (65%)
WD40 <548..792 CDD:441893 134/245 (55%)
WD40 repeat 563..604 CDD:293791 16/40 (40%)
WD40 repeat 609..652 CDD:293791 22/42 (52%)
WD40 repeat 660..695 CDD:293791 19/35 (54%)
WD40 repeat 702..758 CDD:293791 29/55 (53%)
WD40 repeat 764..791 CDD:293791 19/27 (70%)
Elp2XP_308870.5 None

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