DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Git and GLO3

DIOPT Version :9

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:NP_011048.1 Gene:GLO3 / 856859 SGDID:S000000924 Length:493 Species:Saccharomyces cerevisiae


Alignment Length:627 Identity:117/627 - (18%)
Similarity:204/627 - (32%) Gaps:207/627 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SRLQTEVCGDCGAGDPSWASINRGILLCADCCSVHRSLGRHISIVKSLRQGNWEPSVLNFVNSLN 106
            |.::..||.|||..:|:|.|:..|::||..|.:|||::|.||:.|||.....|.      :|:|.
Yeast    24 SNMENRVCFDCGNKNPTWTSVPFGVMLCIQCSAVHRNMGVHITFVKSSTLDKWT------INNLR 82

  Fly   107 AHGANSVWEHHLLDGSTNSTGGKHVPRWRKPTPKDALHPTKSDFIKAKHVNLTFVLKPSLQDDDD 171
            ..                ..||.|..|                         .|.||        
Yeast    83 RF----------------KLGGNHKAR-------------------------DFFLK-------- 98

  Fly   172 GNGSAGCLEQELSRQLHASVRTSNLETSLRFLVQGADPNYYHEDKLSTPLHMAAKFGQASQIEML 236
            .||          :||   :.|:|::...::....|.....|.||      ...|..:....|::
Yeast    99 NNG----------KQL---LNTANVDAKTKYTSPVAKKYKIHLDK------KVQKDMELYPSELV 144

  Fly   237 LIYGADVNALDGNGMTPLELARANNHNTIAERLLDAMY--------DVTDRIITFLGGKKP-DHA 292
            |      |..|.:. :||:.....:.:|..|..:|..:        :.:.::....|...| ::.
Yeast   145 L------NGQDSSD-SPLDTDSDASRSTSKENSVDDFFSNWQKPSSNSSSKLNVNTGSLAPKNNT 202

  Fly   293 SG----------RHMII------PDANGADISEQ--LKIARGKLQLVPNKMFEELVMDLYDEVDR 339
            :|          |..|:      |..|..|..:.  |..:|...:|...|:.:....||:|:. :
Yeast   203 TGSTPKTTVTKTRSSILTASRKKPVLNSQDKKKHSILSSSRKPTRLTAKKVDKSQAEDLFDQF-K 266

  Fly   340 RECEAIWSTSTLNADHATVPFLPAN----PFLSATRNQGRQKLARFNRA--EFTGLLTDV--LVD 396
            :|.:........|:..:|.  :..|    .|::.::......:...|..  ||...|.|.  ..|
Yeast   267 KEAQQEKEDEFTNSSSSTK--IRQNDYDSQFMNNSKGNNNNSIDDINTQPDEFNDFLNDTSNSFD 329

  Fly   397 AMRRQNMANLRPMDAPVAGHQSLQSLPYANNSMLLGSFEQGGHDPNLSDDEPIYDPVASDDDYAP 461
            ..|::....|.|                        .|.:.|....::|          .:|.|.
Yeast   330 TTRKEQQDTLTP------------------------KFAKLGFGMTMND----------ANDLAK 360

  Fly   462 VPPMAQQAIVHTPPRSANSHNEMETLRKQLNDYKSEINQLKNVVQMLSSENTQLKSKFSSASNNS 526
            ....:|:  :...||                 |...|.:.....:.:||:....:..|..|:|..
Yeast   361 QQKESQK--IAQGPR-----------------YTGRIAERYGTQKAISSDQLFGRGSFDEAANRE 406

  Fly   527 VYDEPLRID--LSLSSPDTEHEPLSLPEGGTANGESGSSNDSSNQSTIKRPASMYERRLVPNVAK 589
            .:|:....|  .|:||.....|...:.|.|.....|||                         ..
Yeast   407 AHDKLKTFDNATSISSSSYFGEDKEVDEFGNPINSSGS-------------------------GA 446

  Fly   590 GNTDIRNTTS---MYQMAGDGKPFGEEVKVRSDLVTRRLKEL 628
            ||.|.||:.:   .:..:.|     :|:::..|:|.:..::|
Yeast   447 GNFDGRNSNNGFIDFNASAD-----DELQMLRDVVEQGAEKL 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap 48..164 CDD:279720 30/115 (26%)
Ank_2 187..279 CDD:289560 17/99 (17%)
ANK <187..270 CDD:238125 16/82 (20%)
ANK repeat 187..213 CDD:293786 4/25 (16%)
ANK repeat 215..247 CDD:293786 6/31 (19%)
ANK repeat 249..279 CDD:293786 5/37 (14%)
GIT_SHD 314..342 CDD:285690 6/27 (22%)
GIT 374..404 CDD:128828 7/33 (21%)
GIT1_C 609..727 CDD:289013 4/20 (20%)
GLO3NP_011048.1 COG5347 9..363 CDD:227651 86/456 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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