DRSC/TRiP Functional Genomics Resources

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Protein Alignment Git and GTS1

DIOPT Version :9

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:NP_011334.1 Gene:GTS1 / 852694 SGDID:S000003149 Length:396 Species:Saccharomyces cerevisiae


Alignment Length:336 Identity:75/336 - (22%)
Similarity:127/336 - (37%) Gaps:95/336 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 CGDCGAGDPSWASINRGILLCADCCSVHRSL-GRH----ISIVKSLRQGNWEPSVLNFVNSLNAH 108
            ||:||...|:|.|:|.|:.||..|.||||.: |..    .|.||||....|....::.:.||..:
Yeast    30 CGECGNFYPTWCSVNLGVFLCGRCASVHRKVFGSRDDDAFSNVKSLSMDRWTREDIDELVSLGGN 94

  Fly   109 GANSVWEHHLLDGSTNSTGGKHVPRWRKPTPKDALHPTKSD--------FIKAKHVNLTF---VL 162
            ..|:.:                   |   .||:...|...|        :|:.|::...|   .:
Yeast    95 KGNARF-------------------W---NPKNVPFPFDGDDDKAIVEHYIRDKYILGKFRYDEI 137

  Fly   163 KP----SLQDDDDGNGSAGCLEQELSRQLHASVRTSNLETSLRFLVQGADPNYY----------- 212
            ||    |..||.||.          |.:.....|:.:...|..|...|.:.:.|           
Yeast   138 KPEDFGSRMDDFDGE----------SDRFDERNRSRSRSRSHSFYKGGHNRSDYGGSRDSFQSSG 192

  Fly   213 --HEDKLSTPLHMAAKFGQASQ-IEMLLIYGADVN-ALDGNGMTPLELARANNHNTIAERLLDAM 273
              :..:|:....|.  ||..:: ::.|.....::| |:|     .||.: :::.|:::.....:.
Yeast   193 SRYSRQLAELKDMG--FGDTNKNLDALSSAHGNINRAID-----YLEKS-SSSRNSVSAAATTST 249

  Fly   274 YDVTDRIITFLGGKKPDHASGRHMIIPD--ANGADISEQLKIARGKLQLVPNKMFEELVMDLYDE 336
            ..:..|..| ..|.:|....|.::|.||  :|.|..          :|..| .:|:..:...||.
Yeast   250 PPLPRRRAT-TSGPQPAIFDGTNVITPDFTSNSASF----------VQAKP-AVFDGTLQQYYDP 302

  Fly   337 ------VDRRE 341
                  ||:::
Yeast   303 ATGMIYVDQQQ 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap 48..164 CDD:279720 34/130 (26%)
Ank_2 187..279 CDD:289560 16/106 (15%)
ANK <187..270 CDD:238125 16/97 (16%)
ANK repeat 187..213 CDD:293786 5/38 (13%)
ANK repeat 215..247 CDD:293786 7/33 (21%)
ANK repeat 249..279 CDD:293786 3/29 (10%)
GIT_SHD 314..342 CDD:285690 7/34 (21%)
GIT 374..404 CDD:128828
GIT1_C 609..727 CDD:289013
GTS1NP_011334.1 COG5347 8..310 CDD:227651 73/331 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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