DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Git and ARFGAP2

DIOPT Version :9

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:XP_005253223.1 Gene:ARFGAP2 / 84364 HGNCID:13504 Length:560 Species:Homo sapiens


Alignment Length:555 Identity:113/555 - (20%)
Similarity:175/555 - (31%) Gaps:185/555 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KSRLQT-----------EVCGDCGAGDPSWASINRGILLCADCCSVHRSLGRHISIVKSLR-QGN 93
            |:.:||           :.|.||||.:||||||..|:.||.||..||||||.|:|.::|.. ..|
Human     7 KTEIQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSN 71

  Fly    94 WEPSVLNFVNSLNAHGANSVWEHHLLDGST-NSTGGKHVPR------------------------ 133
            |....|..:.......|.:.:..|   |.| |....|:..|                        
Human    72 WNWFQLRCMQVGGNANATAFFRQH---GCTANDANTKYNSRAAQMYREKIRQLGSAALARHGTDL 133

  Fly   134 W----------RKPTPKDALHPTKSDFIKAKHVNLTFVLKPSLQDDDDGNGS------------A 176
            |          ..|..||      |||. .:|..:...|..|.|.:.....|            |
Human   134 WIDNMSSAVPNHSPEKKD------SDFF-TEHTQVLVGLGASCQQEWLTEASVIWPPFQPPAWDA 191

  Fly   177 GCLEQELSRQLHASVRTSNLETSLRFLVQGADPNY-YHEDKLST-------PLHMAAKFG-QASQ 232
            ...|...::|...|..:|.|          |.|.: .:.|.|.|       .::::||.. .|.:
Human   192 PATEPSGTQQPAPSTESSGL----------AQPEHGPNTDLLGTSPKASLESVYLSAKGALPARE 246

  Fly   233 IEMLLI-----------YGADVNALDGNGMTPLELARANNHNTIAERL-----LDAMYDVTDRII 281
            ::..:|           .||. ..|....::....:.......:||:|     .||.....:.::
Human   247 LKSSIIGKKKPAAAKKGLGAK-KGLGAQKVSSQSFSEIERQAQVAEKLREQQAADAKKQAEESMV 310

  Fly   282 TF---------------------LGGKKPDHAS--GRHMIIPDANGADISEQLKIARGKLQLVPN 323
            ..                     |.|||.:.|.  |..::...:....:..::::...:..:...
Human   311 ASMRLAYQELQIDRKKEEKKLQNLEGKKREQAERLGMGLVSRSSVSHSVLSEMQVIEQETPVSAK 375

  Fly   324 KMFEELVMDLYDEV----------------------DRRECEAIWSTSTLNADHATVPFLPANPF 366
            ....:|  ||:|:|                      .|.:.:|.|....:......|......|.
Human   376 SSRSQL--DLFDDVGTFASGPPKYKDNPFSLGESFGSRWDTDAAWGMDRVEEKEPEVTISSIRPI 438

  Fly   367 LSATRN--------------QGRQKLA---RFNRAEFTGLLTDVLVDAMRR-QNMAN-------- 405
            .....|              :.|||.|   ..:...|.|...|...:|..| |.::.        
Human   439 SERATNRREVESRSSGLESSEARQKFAGAKAISSDMFFGREVDAEYEARSRLQQLSGSSAISSSD 503

  Fly   406 -LRPMD-APVAGHQSLQS-LPYANNSMLLGSFEQG 437
             ...|| |..||..||.: ||.|:    :..|:||
Human   504 LFGDMDGAHGAGSVSLGNVLPTAD----IAQFKQG 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap 48..164 CDD:279720 44/151 (29%)
Ank_2 187..279 CDD:289560 20/116 (17%)
ANK <187..270 CDD:238125 18/107 (17%)
ANK repeat 187..213 CDD:293786 5/26 (19%)
ANK repeat 215..247 CDD:293786 9/50 (18%)
ANK repeat 249..279 CDD:293786 5/34 (15%)
GIT_SHD 314..342 CDD:285690 6/49 (12%)
GIT 374..404 CDD:128828 10/33 (30%)
GIT1_C 609..727 CDD:289013
ARFGAP2XP_005253223.1 PLN03114 1..510 CDD:178661 101/525 (19%)
ArfGap 11..117 CDD:279720 37/108 (34%)
RILP-like 266..>338 CDD:304877 9/72 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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