DRSC/TRiP Functional Genomics Resources

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Protein Alignment Git and Asap3

DIOPT Version :10

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:NP_001414590.1 Gene:Asap3 / 684122 RGDID:1593929 Length:903 Species:Rattus norvegicus


Alignment Length:540 Identity:133/540 - (24%)
Similarity:203/540 - (37%) Gaps:145/540 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 HSDPA------------TPTISTRSKMPRGKSRLQTEVCGDCGAGDPSWASINRGILLCADCCSV 75
            |.:|:            .|...|...:...|||...:.|.||||.||:|.|.|.|:|.|..|..|
  Rat   402 HGEPSGGQWSWGTRLDTEPHDLTNMLVAEVKSRPGNDHCCDCGAADPTWLSTNLGVLTCIQCSGV 466

  Fly    76 HRSLGRHISIVKSLRQGNWEPS-VLNFVNSLNAHGANSVWEHHLLDGSTNSTGGKHVPRWRKPTP 139
            ||.||...|.::||......|| :|..:|..|:| .|.|.|.||             |....|.|
  Rat   467 HRELGVRYSRIQSLTLDLLGPSELLLALNIGNSH-FNEVMEAHL-------------PSHGSPKP 517

  Fly   140 K-DALHPTKSDFIKAKHV----------------------NLTFVLKPSLQDDDDGN---GSAGC 178
            . ::...::.::|.||:|                      :|..||:......|.|.   |..|.
  Rat   518 SAESDMSSRRNYIVAKYVEHKFARRSTPEPQKLRTAICSRDLLSVLEAFANGQDFGQLLPGPDGQ 582

  Fly   179 LEQELSRQLHASVRTSNLETSL---RFLVQ--------GADPNYYHEDKLSTPLHMAAKFGQASQ 232
            ...||:  ||.::|.:: :.||   .||:|        .||.|        |.||.||..||...
  Rat   583 APGELA--LHLAIRVAS-QASLPIVDFLIQNGGHLDAKAADGN--------TALHCAALHGQLDC 636

  Fly   233 IEMLLIYGADVNALDGNGMTPLELARANNHNTIAERLLDAMYDVTDRI---ITFLGGKKPDHASG 294
            :::||...|.:.|::..|.|.|::||...|.. .|.||:.....|...   :.:..|...||.  
  Rat   637 LKLLLKGRAPMGAVNNAGETALDVARNKQHKD-CEELLEQAQAGTLAFPLPMDYHWGHSMDHG-- 698

  Fly   295 RHMIIPDANGADISEQLKIARGKLQLVPNKMFEELVMDLYDEVDRREC------EAIWSTSTLNA 353
                                                .|..:|.:.:.|      :|.||:..|:.
  Rat   699 ------------------------------------FDSEEEEEEKHCPVKPPAQACWSSGRLDI 727

  Fly   354 DHATVPFLPANPFLSATRNQGRQK-----LARFNRAEFTGLLTDVLVDAMRRQNMANLRPMDAPV 413
            .:.|...: |||..:::::|....     :...:|....|...|...|   |.::.:|| .::|.
  Rat   728 SNRTYETV-ANPGPTSSQSQSEDSPPPLPIKNSSRTILLGRAGDSSRD---RSDIPSLR-SESPE 787

  Fly   414 AGHQSLQSLPYANNSMLLGSFEQGGHDPNL-SDDEPIYDPVASDDDYAPVPPMAQ---QAIVHTP 474
            |...  :|.|.:::|....|.|.||....| |.:|.:.:|..:..     |.:|.   .|.|:.|
  Rat   788 ASEN--RSSPASSSSSFTSSVEPGGLSQALPSPEESLQEPPGTSR-----PGLASGTTPAEVYLP 845

  Fly   475 PR-SANSHNEMETLRKQLND 493
            .| |:.|........:.|.|
  Rat   846 VRFSSESTRSYRRGGRNLED 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap_GIT 39..155 CDD:350062 41/117 (35%)
ANKYR <187..>272 CDD:440430 31/95 (33%)
ANK repeat 187..213 CDD:293786 11/36 (31%)
ANK repeat 215..247 CDD:293786 11/31 (35%)
ANK repeat 249..279 CDD:293786 10/29 (34%)
GIT_SHD 314..342 CDD:462506 2/27 (7%)
GIT_SHD 374..402 CDD:462506 5/32 (16%)
GIT1_C 612..731 CDD:463492
Asap3NP_001414590.1 None
Blue background indicates that the domain is not in the aligned region.

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