DRSC/TRiP Functional Genomics Resources

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Protein Alignment Git and asap2a

DIOPT Version :9

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:XP_021322892.1 Gene:asap2a / 570669 ZFINID:ZDB-GENE-041210-256 Length:1003 Species:Danio rerio


Alignment Length:671 Identity:138/671 - (20%)
Similarity:196/671 - (29%) Gaps:278/671 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TRSKMPRGKSRLQTEVCGDCGAGDPSWASINRGILLCADCCSVHRSLGRHISIVKSLRQGNWEPS 97
            |::.:...|.....:||.||||..|:|.|.|.|||.|.:|..:||.||.|.|.::||.......|
Zfish   432 TKAILGEVKRMAGNDVCCDCGAPGPTWLSTNLGILTCIECSGIHRELGVHYSRIQSLTLDVLSTS 496

  Fly    98 VLNFVNSLNAHGANSVWEHHLLDGSTNSTGGKHVPRWRKPTPKDALHP-------TKSDFIKAKH 155
            .|....::...|.|.:.|..|                   |.:|.:.|       .:.|||.||:
Zfish   497 ELLLAKNVGNAGFNEIMEACL-------------------TAEDVIKPNPASDMQARKDFIMAKY 542

  Fly   156 VNLTFVLKPS----------------------LQDDDDG----------NGSAGCLEQELSRQLH 188
            ....|..|..                      :|...:|          ||     .::....||
Zfish   543 TEKRFARKKCPDALSKLHTLCDAVKARDIFSLIQVYAEGVDLMEPIPLANG-----HEQGETALH 602

  Fly   189 ASVRTSNLETSLR---FLVQGADPNYYHEDKL----STPLHMAAKFGQASQIEMLLIYGADVNAL 246
            .:||..: .|||.   ||.|    |..:.||.    ||.||.......:..:::||...|.::..
Zfish   603 LAVRLVD-RTSLHIIDFLTQ----NSLNLDKQTAKGSTALHYCCLTDNSECLKLLLRGKASIDIA 662

  Fly   247 DGNGMTPLELARANNHNTIAERLLDAMYDVTDRIITFLGGKKPDHASGRHMIIPDANGADISEQL 311
            :..|.|||::||...|....|.|..|           |.||...|....:               
Zfish   663 NEAGETPLDIARRLKHLQCEELLNQA-----------LAGKFNAHVHVEY--------------- 701

  Fly   312 KIARGKLQLVPNKMFEELVMDLYDEVDRRECEAIWSTSTLNADHATVPFLPANPFLSATRNQGRQ 376
               ..:||      .|:|     ||.|.            :.|..:.|.                
Zfish   702 ---EWRLQ------HEDL-----DESDE------------DLDEKSSPH---------------- 724

  Fly   377 KLARFNRAEFTGLLTDVLVDAMRRQNMANLRPMDAPVAGHQSLQSLPYANNSMLLGSFEQGGHD- 440
                                  ||..    ||:.....|..|||..|        .|..:.|.| 
Zfish   725 ----------------------RRDE----RPISCYTPGSNSLQLSP--------ASLSRDGRDL 755

  Fly   441 --------PNLSDDEP------IYDPVASDDDYAPVPPMAQQAIVHTPPRSANSHNEMETLRKQL 491
                    |||.::|.      ...||:......|:||                           
Zfish   756 VKDKQRFVPNLVNNETYGTIINTSSPVSLSSSAPPLPP--------------------------- 793

  Fly   492 NDYKSEINQLKNVVQMLSSENTQLKSKFSSASNNSVYDEPLRIDLSLSSPDTEHEPLSLPEGGTA 556
                      :|:||         .|..:..:..|...:|..:|||                   
Zfish   794 ----------RNLVQ---------PSALAGLTQGSPGWKPGSLDLS------------------- 820

  Fly   557 NGESGSSNDSSNQSTIKRPASMYERRLV------PNVAKGNTDIRNTTSMYQMAGDGKP------ 609
             |...||:|..|......|..:....|:      |.:||. |.:..|.:|....|.|.|      
Zfish   821 -GRQRSSSDPPNMHPPAPPLRVTSTSLLMPSGAAPPLAKA-TGMMETMNMQPKPGQGPPGQNINR 883

  Fly   610 -------FGEEVKVRSDLVTR 623
                   |.:...:||..:.|
Zfish   884 ATSADKNFSKSTLMRSGSIER 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap 48..164 CDD:279720 38/122 (31%)
Ank_2 187..279 CDD:289560 30/98 (31%)
ANK <187..270 CDD:238125 28/89 (31%)
ANK repeat 187..213 CDD:293786 11/28 (39%)
ANK repeat 215..247 CDD:293786 9/35 (26%)
ANK repeat 249..279 CDD:293786 10/29 (34%)
GIT_SHD 314..342 CDD:285690 7/27 (26%)
GIT 374..404 CDD:128828 2/29 (7%)
GIT1_C 609..727 CDD:289013 5/28 (18%)
asap2aXP_021322892.1 BAR_ASAP2 34..257 CDD:153326
PH_ASAP 309..415 CDD:270071
ArfGap 433..550 CDD:307528 39/135 (29%)
ANK repeat 562..594 CDD:293786 4/36 (11%)
ANK <597..685 CDD:238125 28/92 (30%)
ANK repeat 597..630 CDD:293786 13/37 (35%)
ANK repeat 632..663 CDD:293786 7/30 (23%)
SH3 945..1000 CDD:327375
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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