DRSC/TRiP Functional Genomics Resources

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Protein Alignment Git and asap1b

DIOPT Version :9

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:XP_009295584.2 Gene:asap1b / 565859 ZFINID:ZDB-GENE-091112-16 Length:1137 Species:Danio rerio


Alignment Length:586 Identity:133/586 - (22%)
Similarity:209/586 - (35%) Gaps:161/586 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 EVCGDCGAGDPSWASINRGILLCADCCSVHRSLGRHISIVKSLRQGNWEPSVLNFVNSLNAHGAN 111
            |.|.||||.||.|.|.|.|||.|.:|..:||.:|.|||.::|:.......|.|....::.....|
Zfish   456 EWCCDCGAPDPKWLSTNLGILTCIECSGIHREMGVHISRIQSMELDKLGTSELLLAKNVGNSSFN 520

  Fly   112 SVWEHHLLDGSTNSTGGKHVPRWRKPTPKDALHPTKSDFIKAKHVNLTFVLKPSLQDDDDGN--- 173
            .:.|           ||...|. .||||...: ..:.:||.||:|:..|..|.....:|..:   
Zfish   521 DIME-----------GGLSCPS-SKPTPSSDM-TVRKEFINAKYVDHKFARKTCSSAEDKRSDLF 572

  Fly   174 ---GSAGCL--------------------EQELSRQLHASVRTSNLETSLR---FLVQGADPNYY 212
               ||...|                    ::.....||.:|||:: :|||.   ||||.:.....
Zfish   573 KAVGSHDLLALIQVYAEGVELLEPLHEGGQEGGETALHYAVRTAD-QTSLHLVDFLVQNSGNLDK 636

  Fly   213 HEDKLSTPLHMAAKFGQASQIEMLLIYGADVNALDGNGMTPLELARANNHNTIAERLLDAMYDVT 277
            ..::.:|.||....:.:...:::||......:..:.||.|.|::||........|.|:.|     
Zfish   637 QTERGNTALHYCCLYEKHECLKLLLRGKPATDITNQNGDTALDVARRMKLFQCEEALVQA----- 696

  Fly   278 DRIITFLGGKKPDHASGRHMIIPDANGADISEQLKIARGKLQLVPNKMFEELVMDL-YDEVDRRE 341
                                                |.||..   .|:..|...:| .:|:|..:
Zfish   697 ------------------------------------AAGKFN---TKVHVEYEWNLRLEELDESD 722

  Fly   342 CEAIWSTSTLNADHATVP-------FLPANPFLSATRNQGRQKLARFNRAEFTGLLTDVLVD--- 396
            .:..:..|.:..|.:..|       .|..:..||.....|::...|.:.:.||..:..|..|   
Zfish   723 DDLDYKPSPIKKDRSPRPQSFCHSSSLSPHDKLSLPAFIGQRDKQRLSYSAFTNQMYSVSTDCPS 787

  Fly   397 -------------AMRRQNMANLRPMD-APVAGHQSLQSLPYANNSMLLGSFEQ-----GGHDPN 442
                         |.:...::||.|.. ||.:     |:.|..::::   |.::     .||...
Zfish   788 SPVSDAPPLPPRNAGKAPPLSNLPPSTLAPAS-----QTSPSGSSTL---SKKRPPPPPPGHKRT 844

  Fly   443 LSD-DEPIYDPVASDDDYAPVPPMA----------QQAIVHTP-----PRSANSHNEMETLRKQL 491
            ||| ..|::.  .||....||..|:          ||...:|.     ||......:...|||..
Zfish   845 LSDPPTPLFK--GSDSTPPPVNKMSPVTNRFEGIPQQQSPNTTKPTLGPRVLPKLPQKVALRKID 907

  Fly   492 NDYKSEI---NQLKNVV---QMLSSENTQLKSKFSSASNNSVYDEPLRIDLSLSSPDTEHEPLSL 550
            ..:...:   ||....|   ::|.|.:|..|.        .:.|.|...|::...|    :|..|
Zfish   908 TIHHPSVDKTNQPSEAVLFQKVLQSSDTSQKV--------PIADRPQPGDVAPQRP----QPSEL 960

  Fly   551 P 551
            |
Zfish   961 P 961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap 48..164 CDD:279720 39/115 (34%)
Ank_2 187..279 CDD:289560 26/94 (28%)
ANK <187..270 CDD:238125 24/85 (28%)
ANK repeat 187..213 CDD:293786 12/28 (43%)
ANK repeat 215..247 CDD:293786 5/31 (16%)
ANK repeat 249..279 CDD:293786 9/29 (31%)
GIT_SHD 314..342 CDD:285690 8/28 (29%)
GIT 374..404 CDD:128828 7/45 (16%)
GIT1_C 609..727 CDD:289013
asap1bXP_009295584.2 BAR_ASAP1 54..268 CDD:153325
PH_ASAP 320..426 CDD:270071
ArfGap 443..559 CDD:307528 40/115 (35%)
ANK 565..694 CDD:238125 28/129 (22%)
ANK repeat 604..638 CDD:293786 12/34 (35%)
ANK repeat 640..671 CDD:293786 5/30 (17%)
ANK repeat 673..698 CDD:293786 9/65 (14%)
Atrophin-1 <793..1067 CDD:331285 42/191 (22%)
SH3_ASAP1 1079..1135 CDD:212898
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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