DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Git and ADAP2

DIOPT Version :9

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:XP_024306599.1 Gene:ADAP2 / 55803 HGNCID:16487 Length:403 Species:Homo sapiens


Alignment Length:492 Identity:102/492 - (20%)
Similarity:155/492 - (31%) Gaps:185/492 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 CGDCGAGDPSWASINRGILLCADCCSVHRSLGRHISIVKSLRQGNWEPSVLNFVNSLNAHGANSV 113
            |.||||.||.|||...||.:|.:||.|||:. ..||.|||:|...|:.|::.|:    .|..|. 
Human    25 CADCGAADPDWASYKLGIFICLNCCGVHRNF-PDISRVKSVRLDFWDDSIVEFM----IHNGNL- 83

  Fly   114 WEHHLLDGSTNSTGGKHVPR-WRKPTPKDALHPTKSDFIKAKHVNLTFVLKP---SLQDDDDG-- 172
                    ...:.....||. :..|...|.| ..|..:|:||:....|:...   ||..:.:|  
Human    84 --------RVKAKFEARVPAFYYIPQANDCL-VLKEQWIRAKYERREFMADGETISLPGNREGFL 139

  Fly   173 --NGSAGCLEQELSRQLHASVRTSNLETSLRFLV--QGADPN----------YYHEDKLSTPLHM 223
              .|...  .|.|.|:.....|    |..|::..  ||..|.          .:..:|:..|..:
Human   140 WKRGRDN--SQFLRRKFVLLAR----EGLLKYFTKEQGKSPKAVISIKDLNATFQTEKIGHPHGL 198

  Fly   224 AAKFGQASQIEMLLIYGADVNALDGNGMTPLELARANNHNTIAERLLDAMYDVTDRIITFLGGKK 288
            ...:.:......|.:|                                                 
Human   199 QITYRRDGHTRNLFVY------------------------------------------------- 214

  Fly   289 PDHASGRHMIIPDANGADISEQLKIARGKLQLVPNKM-FEELVMDLYDEVDRRECEAIWSTSTLN 352
              |.||:.::       |....|:.||  ||.:  || |.||                       
Human   215 --HESGKEIV-------DWFNALRAAR--LQYL--KMAFPEL----------------------- 243

  Fly   353 ADHATVPFLPAN----PFLSATRNQGRQKLARFNRAEFTGLLTDVLVDAMRRQNMANLRPMDAPV 413
            .:...||||..|    .|:..|   |.::...|.:..|.       :|...|:.:....|:||  
Human   244 PESELVPFLTRNYLKQGFMEKT---GPKQKEPFKKRWFA-------LDCHERRLLYYKNPLDA-- 296

  Fly   414 AGHQSLQSLPYANNSMLLGSFEQGGHDPNLSDDEPIYDPVASDDDYAPVPP-------------- 464
                      :....:.||:.|||            |:.      |..:|.              
Human   297 ----------FEQGQVFLGNKEQG------------YEA------YEDLPKGIRGNRWKAGLTIV 333

  Fly   465 MAQQAIVHTPPRSANSHNEMETLRKQLNDYKSEINQL 501
            ..::..|.|.|........:|:||..|:...:.:|:|
Human   334 TPERRFVLTCPSEKEQQEWLESLRGVLSSPLTPLNRL 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap 48..164 CDD:279720 39/115 (34%)
Ank_2 187..279 CDD:289560 10/103 (10%)
ANK <187..270 CDD:238125 10/94 (11%)
ANK repeat 187..213 CDD:293786 6/37 (16%)
ANK repeat 215..247 CDD:293786 4/31 (13%)
ANK repeat 249..279 CDD:293786 0/29 (0%)
GIT_SHD 314..342 CDD:285690 9/28 (32%)
GIT 374..404 CDD:128828 5/29 (17%)
GIT1_C 609..727 CDD:289013
ADAP2XP_024306599.1 ArfGap 8..126 CDD:307528 39/115 (34%)
PH1_ADAP 133..241 CDD:270072 26/175 (15%)
PH2_ADAP 255..362 CDD:241282 26/146 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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