DRSC/TRiP Functional Genomics Resources

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Protein Alignment Git and zgc:92360

DIOPT Version :9

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:NP_001002715.1 Gene:zgc:92360 / 436988 ZFINID:ZDB-GENE-040718-470 Length:377 Species:Danio rerio


Alignment Length:195 Identity:55/195 - (28%)
Similarity:81/195 - (41%) Gaps:46/195 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 CGDCGAGDPSWASINRGILLCADCCSVHRSLGRHISIVKSLRQGNWEPSVLNFVNSLNAHGANSV 113
            |.||||.:|.|.|.:.|:.:|..|..||||:.. |..|||||...||.|.:.|::........:|
Zfish    23 CADCGADNPEWGSCSLGVFICLACSGVHRSIPT-IGKVKSLRLSRWEDSEVQFLSECGNDLMKAV 86

  Fly   114 WEHHLLDGSTNSTGGKHVP-RWRKPTPKDALHPTKSDFIKAKHVNLTFV---LKPSLQDDD-DG- 172
            :|             ..|| .:.|||.:|. ...|..:|:||:....|.   .|.:.:|:. || 
Zfish    87 YE-------------AAVPVYYYKPTHRDC-QVLKEQWIRAKYERQEFTEVGKKLTYEDESRDGM 137

  Fly   173 -------NGSAGCLEQELSRQLHASVRTSNLETSLRFLVQGADPN----------YYHEDKLSTP 220
                   ||      |.|:|:...|||...|:...:  :...:|.          .:..||:..|
Zfish   138 LMKRGRDNG------QFLNRRFVLSVREGILKYYTK--LDAKEPKALMKVDTLNACFQPDKIGNP 194

  Fly   221  220
            Zfish   195  194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap 48..164 CDD:279720 38/118 (32%)
Ank_2 187..279 CDD:289560 8/44 (18%)
ANK <187..270 CDD:238125 8/44 (18%)
ANK repeat 187..213 CDD:293786 5/35 (14%)
ANK repeat 215..247 CDD:293786 3/6 (50%)
ANK repeat 249..279 CDD:293786
GIT_SHD 314..342 CDD:285690
GIT 374..404 CDD:128828
GIT1_C 609..727 CDD:289013
zgc:92360NP_001002715.1 ArfGap 8..124 CDD:279720 38/115 (33%)
PH1_ADAP 132..240 CDD:270072 15/71 (21%)
PH 134..230 CDD:278594 15/69 (22%)
PH2_ADAP 254..359 CDD:241282
PH 257..358 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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