DRSC/TRiP Functional Genomics Resources

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Protein Alignment Git and AGFG1

DIOPT Version :9

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:NP_001128659.1 Gene:AGFG1 / 3267 HGNCID:5175 Length:584 Species:Homo sapiens


Alignment Length:613 Identity:120/613 - (19%)
Similarity:205/613 - (33%) Gaps:165/613 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KMPRGKSRL-QTEVCGDCGAGDPSWASINRGILLCADCCSVHRSLG-RHISIVKSLRQGNWEPSV 98
            ||.|..:.| ....|.||....|::.::..|..:|..|....|.|. .|  .|||:....:....
Human    15 KMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPH--RVKSISMTTFTQQE 77

  Fly    99 LNFVNSLNAHG---ANSVWEHHLLDGSTNSTGGKHVPRWRKPTPKDALHPTKSDFIKAKHVNLTF 160
            :.|   |..||   ...:| ..|.|..:::     :|.:|.|       ....:|::.|:....:
Human    78 IEF---LQKHGNEVCKQIW-LGLFDDRSSA-----IPDFRDP-------QKVKEFLQEKYEKKRW 126

  Fly   161 VLKPSLQDDDDGNGSAGCLEQELSRQLHASVRTSNLETS--------LRFLVQGADPNYYHEDKL 217
            .:.|.              :.::...:|||:..|:..::        |:.|:..:.|. .|.:| 
Human   127 YVPPE--------------QAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPT-LHLNK- 175

  Fly   218 STPLH---MAAKFGQ---ASQIEMLLIYGADVNALDGNGMTP----LELARANNHNTIAERLLDA 272
            .||..   :....||   ..|.::|...|:|:.|......|.    ...|..|:|  .|:...:|
Human   176 GTPSQSPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSH--AAQNSANA 238

  Fly   273 MYDVTDRIITFLGGKKPDHASGRHMI--IPDANGADISEQLKIARGKLQLVPNKMFEELVMDLYD 335
            .:...|..         ..:||....  .|.|:.:....|....|   .|..:..|.|     :.
Human   239 DFANFDAF---------GQSSGSSNFGGFPTASHSPFQPQTTAFR---MLSSSCSFGE-----FT 286

  Fly   336 EVDRRECEAIWSTSTLNADHATVPFLPAN---PFLSATRNQGRQKLARFNRAEFTGLLTDVLVDA 397
            .....:.....|.:::||:.|.....|.:   .|.:...:|..|..:..::..            
Human   287 SAFPLQATHSGSAASVNANFAHFDNFPKSSSADFGTFNTSQSHQTASAVSKVS------------ 339

  Fly   398 MRRQNMANLRPMDAPVAGHQSLQSLPYANNSMLLGSFEQGGHDPNLSDDEPIYDPVASDDDYAPV 462
               .|.|.|:..|...|       |...:|....|   |||      |....:.....    |||
Human   340 ---TNKAGLQTADKYAA-------LANLDNIFSAG---QGG------DQGSGFGTTGK----APV 381

  Fly   463 PPMAQQAIVHTPPRSANSHNEMETLRKQLNDYKSEINQLKNVVQMLSSENTQLKSKFSSASNNSV 527
                 .::|..|.:|:.|           :|..:.:.:|.:|....::.:....|. |:||:|..
Human   382 -----GSVVSVPSQSSAS-----------SDKYAALAELDSVFSSAATSSNAYTST-SNASSNVF 429

  Fly   528 YDEPLRIDLSLSSPDTEHEPLSLPE--GGT--------ANGESGSSNDSSNQSTIKRPASMYERR 582
            ...|:     ::|..|:....|:|.  |.|        |.|.|.:|:.:..|:.           
Human   430 GTVPV-----VASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTN----------- 478

  Fly   583 LVPNVAKGNTDIR-NTTSMYQMAGDGKP 609
                 |:|.|... .|.||....|.|.|
Human   479 -----ARGATAATFGTASMSMPTGFGTP 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap 48..164 CDD:279720 25/119 (21%)
Ank_2 187..279 CDD:289560 24/109 (22%)
ANK <187..270 CDD:238125 23/100 (23%)
ANK repeat 187..213 CDD:293786 7/33 (21%)
ANK repeat 215..247 CDD:293786 10/37 (27%)
ANK repeat 249..279 CDD:293786 6/33 (18%)
GIT_SHD 314..342 CDD:285690 4/27 (15%)
GIT 374..404 CDD:128828 2/29 (7%)
GIT1_C 609..727 CDD:289013 1/1 (100%)
AGFG1NP_001128659.1 COG5347 8..319 CDD:227651 69/356 (19%)
ArfGap 14..135 CDD:214518 30/151 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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