DRSC/TRiP Functional Genomics Resources

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Protein Alignment Git and agap3

DIOPT Version :10

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:XP_009295860.1 Gene:agap3 / 324332 ZFINID:ZDB-GENE-110927-1 Length:1295 Species:Danio rerio


Alignment Length:299 Identity:79/299 - (26%)
Similarity:122/299 - (40%) Gaps:59/299 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RGKSRLQTE----------------VCGDCGAGDPSWASINRGILLCADCCSVHRSLGRHISIVK 87
            :.||||.::                .|.||.|.:|.|||:|.|.|:|.:|..:||:||.|:|.|:
Zfish  1031 KNKSRLGSQSDALAIQSIRNVRGNSFCADCDAPNPDWASLNLGALICIECSGMHRNLGTHLSRVR 1095

  Fly    88 SLRQGNWEPSVLNFVNSLNAHGANSVWEHHLLDGSTNSTGGKHVPRWRKPTPKDALHPTKSDFIK 152
            ||...:|...:...:.::....|||||| ..:||            :.|| ..|:....|..:|:
Zfish  1096 SLDLDDWPVELSMVMTAIGNAMANSVWE-ACVDG------------YNKP-GVDSTREEKERWIR 1146

  Fly   153 AKHVNLTFVLKPSLQDDDDGNGSAGCLEQELSRQLHASVRTSNLETSLRFLVQGADPNY---YHE 214
            ||:....||:  :|...|          ..|.:||..:|...:|...:..|..|.....   |.:
Zfish  1147 AKYEQKLFVV--ALPQSD----------VPLGQQLLRAVVEDDLRLVVLLLAHGTKEEVNETYGD 1199

  Fly   215 DKLSTPLHMAAKFGQASQIEMLLIYGADVNALDGNGMTPLELARANNHNTIAERLLDAMYDVTDR 279
            ....|.||::.........::|:.||.||.:.|..|.|||..|:.......|:.|:.......  
Zfish  1200 GDGRTALHLSCAMANVVITQLLIWYGVDVKSRDARGQTPLSYAQRAGSQECADILIQHGCPAE-- 1262

  Fly   280 IITFLGGKKPDHASGRHMIIPDANG-----ADISEQLKI 313
                 ||......:.||.  |:.|.     |:::..|.|
Zfish  1263 -----GGALSTPTATRHN--PNINNNNGQCAELNRSLSI 1294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap_GIT 39..155 CDD:350062 41/131 (31%)
ANKYR <187..>272 CDD:440430 22/87 (25%)
ANK repeat 187..213 CDD:293786 5/28 (18%)
ANK repeat 215..247 CDD:293786 8/31 (26%)
ANK repeat 249..279 CDD:293786 7/29 (24%)
GIT_SHD 314..342 CDD:462506 79/299 (26%)
GIT_SHD 374..402 CDD:462506
GIT1_C 612..731 CDD:463492
agap3XP_009295860.1 Centaurin_gamma 509..666 CDD:133303
PH_AGAP 778..1025 CDD:241281
ArfGap_AGAP3 1041..1150 CDD:350080 38/122 (31%)
ANKYR <1199..>1258 CDD:440430 16/58 (28%)
ANK repeat 1201..1232 CDD:293786 8/30 (27%)
ANK repeat 1234..1259 CDD:293786 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.

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