DRSC/TRiP Functional Genomics Resources

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Protein Alignment Git and Acap1

DIOPT Version :9

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:NP_722483.2 Gene:Acap1 / 216859 MGIID:2388270 Length:740 Species:Mus musculus


Alignment Length:359 Identity:90/359 - (25%)
Similarity:138/359 - (38%) Gaps:71/359 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 HSDPATPTI----STRSKMPRGKSRLQTEV--------CGDCGAGDPSWASINRGILLCADCCSV 75
            |:..:..|:    :.|.:...|..::..:|        |.||....|.|||||.|:.||..|..:
Mouse   382 HAPGSAATLACGGAARGRESGGVGQVAAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGI 446

  Fly    76 HRSLGRHISIVKSLRQGNWEPSVLNFVNSLNAHGANSVWEHHLLDGSTNSTGGKHVPRWRKPTPK 140
            |||||.|.|.|:||...:|||.::..:..|.....|.::|..:           .....:||.| 
Mouse   447 HRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVIINQIYEARV-----------EAMAVKKPGP- 499

  Fly   141 DALHPTKSDFIKAKHVNLTFVLK-PSLQDDDDGNG-----------------------SAGCLEQ 181
            ......|..:|.||:|...|:.| |.::....|.|                       .:.|...
Mouse   500 SCSRQEKEAWIHAKYVEKKFLTKLPEIRGRRGGRGPPRGHPPVPPKPPIRPHSGIVRSKSECPSD 564

  Fly   182 ELSRQLH-------ASVRTSNLETSLRFLVQGADPNYYHEDK-LSTPLHMAAKFGQASQIEMLLI 238
            ::. .||       |:....:|.|....|..|||.|:.:..: .:|||..|.........|.||.
Mouse   565 DMG-SLHPGALLFQAAGHPPSLPTMADALAHGADVNWVNVGQGNATPLIRATAANSLLACEFLLQ 628

  Fly   239 YGADVNALDGNGMTPLELARANNHNTIAERLLDAMYDVTDRIITFLGGKKPDHASGRH--MIIPD 301
            .||:||..|..|..||..|....|..:|...|....|        ||.:..:   ||.  .|..:
Mouse   629 NGANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD--------LGARDTE---GRDPLTIAME 682

  Fly   302 ANGADISEQLKIAR-GKLQLVPNKMFEELVMDLY 334
            ...|||...|::|: .:.:....:..:|..:|::
Mouse   683 TTNADIVTLLRLAKMREAEAAQGQAGDETYLDIF 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap 48..164 CDD:279720 40/124 (32%)
Ank_2 187..279 CDD:289560 30/99 (30%)
ANK <187..270 CDD:238125 28/90 (31%)
ANK repeat 187..213 CDD:293786 10/32 (31%)
ANK repeat 215..247 CDD:293786 11/32 (34%)
ANK repeat 249..279 CDD:293786 8/29 (28%)
GIT_SHD 314..342 CDD:285690 3/22 (14%)
GIT 374..404 CDD:128828
GIT1_C 609..727 CDD:289013
Acap1NP_722483.2 Required for formation of endosomal tubules when overexpressed with PIP5K1C. /evidence=ECO:0000250|UniProtKB:Q15027 1..382 90/359 (25%)
BAR_ACAP1 18..217 CDD:153323
PH 266..360 CDD:278594
PH_ACAP 268..364 CDD:270070
Required for interaction with GULP1. /evidence=ECO:0000250|UniProtKB:Q15027 405..740 86/336 (26%)
ArfGap 406..519 CDD:279720 38/124 (31%)
Prevents interaction with ITGB1 when S-554 is not phosphorylated. /evidence=ECO:0000250 525..566 3/40 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 525..562 2/36 (6%)
Ank_2 575..670 CDD:289560 30/102 (29%)
ANK repeat 575..602 CDD:293786 8/26 (31%)
ANK <592..692 CDD:238125 33/110 (30%)
ANK repeat 606..637 CDD:293786 11/30 (37%)
ANK repeat 639..670 CDD:293786 10/38 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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