DRSC/TRiP Functional Genomics Resources

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Protein Alignment Git and Agap2

DIOPT Version :10

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:XP_006513621.1 Gene:Agap2 / 216439 MGIID:3580016 Length:1342 Species:Mus musculus


Alignment Length:192 Identity:61/192 - (31%)
Similarity:94/192 - (48%) Gaps:29/192 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 CGDCGAGDPSWASINRGILLCADCCSVHRSLGRHISIVKSLRQGNWEPSVLNFVNSLNAHGANSV 113
            |.||||.:|:|||:|.|.|:|.:|..:||:||.|:|.|:||...:|...:...:.::....||.|
Mouse   940 CVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPRELTLVLTAIGNDTANRV 1004

  Fly   114 WEHHLLDGSTNSTGGKHVPRWRKPTPKDALHPTKSDFIKAKHVNLTFVLKPSLQDDDDGNGSAGC 178
            ||        :.|.|:     .||| :|:....:..:|:||:..|.| |.|           .|.
Mouse  1005 WE--------SDTRGR-----AKPT-RDSSREERESWIRAKYEQLLF-LAP-----------LGT 1043

  Fly   179 LEQELSRQLHASVRTSNLETSLRFLV---QGADPNYYHEDKLSTPLHMAAKFGQASQIEMLL 237
            .|:.|.|||.|:|...::...|..|.   .|.......:.:|.:|||:||:.......::||
Mouse  1044 TEEPLGRQLWAAVEAQDVAAVLLLLAHARHGPLDTSVEDPQLRSPLHLAAELAHVVITQLLL 1105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap_GIT 39..155 CDD:350062 37/105 (35%)
ANKYR <187..>272 CDD:440430 14/54 (26%)
ANK repeat 187..213 CDD:293786 6/28 (21%)
ANK repeat 215..247 CDD:293786 8/23 (35%)
ANK repeat 249..279 CDD:293786
GIT_SHD 314..342 CDD:462506
GIT_SHD 374..402 CDD:462506
GIT1_C 612..731 CDD:463492
Agap2XP_006513621.1 PHA03247 <52..320 CDD:223021
Centaurin_gamma 401..560 CDD:133303
PH_AGAP 668..908 CDD:241281
ArfGap_AGAP 926..1033 CDD:350065 38/106 (36%)
Blue background indicates that the domain is not in the aligned region.

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