DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Git and Asap2

DIOPT Version :9

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:XP_006515110.1 Gene:Asap2 / 211914 MGIID:2685438 Length:1003 Species:Mus musculus


Alignment Length:602 Identity:141/602 - (23%)
Similarity:200/602 - (33%) Gaps:178/602 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 EVCGDCGAGDPSWASINRGILLCADCCSVHRSLGRHISIVKSLRQGNWEPSVLNFVNSLNAHGAN 111
            :||.||||.||:|.|.|.|||.|.:|..:||.||.|.|.::||.......|.|....::...|.|
Mouse   437 DVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKNIGNAGFN 501

  Fly   112 SVWEHHLLDGSTNSTGGKHVPRWRKPTP-KDALHPTKSDFIKAKHVNLTFVLKPS---------- 165
            .:.|..|  .|.:..         ||.| .|.:  .:.|:|.||::...:..|..          
Mouse   502 EIMECCL--PSEDPV---------KPNPGSDMI--ARKDYITAKYMERRYARKKHADTAAKLHSL 553

  Fly   166 ------------LQDDDDG----------NGSAGCLEQELSRQLHASVRTSNLETSLR---FLVQ 205
                        ||...||          ||     .:.....||.:||:.: .|||.   ||||
Mouse   554 CEAVKTRDIFGLLQAYADGVDLTEKIPLANG-----HEPDETALHLAVRSVD-RTSLHIVDFLVQ 612

  Fly   206 GADPNYYHEDKLSTPLHMAAKFGQASQIEMLLIYGADVNALDGNGMTPLELARANNHNTIAERLL 270
            .:........|.||.||.......|..:::||...|.:...:.:|.|||::|:...|....|.|.
Mouse   613 NSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLT 677

  Fly   271 DAMYDVTDRIITFLGGKKPDHASGR---HMIIP----------DANGADISEQLKIARGKLQLVP 322
            .|:                   |||   |:.:.          |.:..|:.|       |||..|
Mouse   678 QAL-------------------SGRFNSHVHVEYEWRLLHEDLDESDDDVDE-------KLQPSP 716

  Fly   323 NKMFEELVMDLY----DEVDRRECEAIWSTSTLNADH---------------------------- 355
            |:. |:..:..|    .:...........|:.|..|.                            
Mouse   717 NRR-EDRPVSFYQLGSSQFQSNAVSLARDTANLTKDKQRGFGPSILQNETYGAILSGSPPSSQSI 780

  Fly   356 ----ATVPFLPANPFLSATRNQGRQKLARFNRAEFTGLLTDVLVDAMRRQNMANLRPMDAPVAGH 416
                .:.|.||       .||.|:.:.|  ..|........|.||.:.||..::    |.| |.|
Mouse   781 PPSTTSAPPLP-------PRNVGKVQTA--TSANTLWKTNSVGVDGISRQRSSS----DLP-AVH 831

  Fly   417 QSLQSL--------------PYANNSMLLGSFEQGGHDPNLSDDEPIYDPVASDDDYAPVPPMAQ 467
            ..|..|              |.|..|..|.:..|    |:.|.     .|..|.....|:||...
Mouse   832 PPLPPLRVTSTNPLTTTPPPPVAKTSGTLEAMNQ----PSKSS-----QPGTSQSKPPPLPPQPP 887

  Fly   468 QAIVHTPPRSANSHNEMETLRKQLNDYKSEINQLKNVVQM-------LSSENTQLKSKFSSASNN 525
            ..:....|.|........|.:.|....::. ..|.|.:.:       ..|:.|:.|.|...|..|
Mouse   888 SRLPQKKPASGTDKPTPLTNKGQPRGPEAS-GPLSNAMALQPPAPMPRKSQATKSKPKRVKALYN 951

  Fly   526 SVYDEPLRIDLSLSSPD 542
            .|.|.|  .:|:.|..|
Mouse   952 CVADNP--DELTFSEGD 966

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap 48..164 CDD:279720 39/116 (34%)
Ank_2 187..279 CDD:289560 29/94 (31%)
ANK <187..270 CDD:238125 27/85 (32%)
ANK repeat 187..213 CDD:293786 11/28 (39%)
ANK repeat 215..247 CDD:293786 9/31 (29%)
ANK repeat 249..279 CDD:293786 9/29 (31%)
GIT_SHD 314..342 CDD:285690 7/31 (23%)
GIT 374..404 CDD:128828 8/29 (28%)
GIT1_C 609..727 CDD:289013
Asap2XP_006515110.1 BAR_ASAP2 34..248 CDD:153326
PH_ASAP 300..406 CDD:270071
ArfGap_ASAP2 422..544 CDD:350074 40/119 (34%)
ANK repeat 553..585 CDD:293786 6/36 (17%)
ANK repeat 589..621 CDD:293786 11/32 (34%)
Ank_2 592..676 CDD:372319 27/84 (32%)
ANK repeat 623..654 CDD:293786 9/30 (30%)
SH3_ASAP2 945..1000 CDD:212899 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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