DRSC/TRiP Functional Genomics Resources

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Protein Alignment Git and Agfg1

DIOPT Version :9

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:XP_006496493.1 Gene:Agfg1 / 15463 MGIID:1333754 Length:577 Species:Mus musculus


Alignment Length:651 Identity:120/651 - (18%)
Similarity:196/651 - (30%) Gaps:250/651 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KMPRGKSRL-QTEVCGDCGAGDPSWASINRGILLCADCCSVHRSLG-RHISIVKSLRQGNWEPSV 98
            ||.|..:.| ....|.||....|::.::..|..:|..|....|.|. .|  .|||:....:....
Mouse    15 KMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPPH--RVKSISMTTFTQQE 77

  Fly    99 LNFVNSLNAHG---ANSVWEHHLLDGSTNSTGGKHVPRWRKPTPKDALHPTKSDFIKAKHVNLTF 160
            :.|   |..||   ...:| ..|.|..:::     :|.:|.|       ....:|::.|:....:
Mouse    78 IEF---LQKHGNEVCKQIW-LGLFDDRSSA-----IPDFRDP-------QKVKEFLQEKYEKKRW 126

  Fly   161 VLKPSLQDDDDGNGSAGCLEQELSRQLHASVRTSNLETSLRFLVQGADPNYYHEDKLSTPLHMAA 225
            .:.|.              :.::...:|||:..|:..::                 .|||     
Mouse   127 YVPPE--------------QAKVVASVHASISGSSASST-----------------SSTP----- 155

  Fly   226 KFGQASQIEMLLIYGADVNALDGNGMTPLELARANNHNTIAERLLDAMYDVTDRIITFLGGKKPD 290
               :...::.||  |....||..|..||                                     
Mouse   156 ---EVKPLKSLL--GESAPALHLNKGTP------------------------------------- 178

  Fly   291 HASGRHMIIPDANGADISEQLKIARGKLQLVPNKMFEELVMDLYDEVDRRECEAIWSTSTLNADH 355
                             |:...:.|.:.|....|.| :|:.||..::                  
Mouse   179 -----------------SQSPVVGRSQGQQQEKKQF-DLLSDLGSDI------------------ 207

  Fly   356 ATVPFLPANPFLSATRNQGRQKLARFNRAEFTGLLTDVLVDAMRRQNMAN--LRPMDA--PVAGH 416
                |....|..:||.|..  ..|.||              :...||.||  ....||  ..:|.
Mouse   208 ----FAAPAPQSTATANFA--NFAHFN--------------SHAAQNSANADFANFDAFGQSSGS 252

  Fly   417 QSLQSLPYANNSMLLGSFE---QGGHDPNLSDDEPIYD--PVASDDDYAPVPPMAQQAIVHTPPR 476
            .:....|.|::|    ||:   .||...:::.:...:|  |.:|..|:...             .
Mouse   253 SNFGGFPTASHS----SFQPQTTGGSAGSVNANFAHFDNFPKSSSADFGTF-------------S 300

  Fly   477 SANSHNEMETLRK--------QLNDYKSEINQLKNV--------------------------VQM 507
            ::.||....|:.|        |..|..:.:..|.|:                          |..
Mouse   301 TSQSHQTASTVSKVSTNKAGLQTADKYAALANLDNIFSAGQGGDQGSGFGTTGKAPVGSVVSVPS 365

  Fly   508 LSSENT-------QLKSKFSSASNNS-VYDEPLRIDLSL-------SSPDTEHEPLS---LPEGG 554
            .||.::       :|.|.||||:.:| .|........|:       :|..|  :|.|   .|.|.
Mouse   366 HSSASSDKYAALAELDSVFSSAATSSNAYTPTSNASSSVFGTVPVGASAQT--QPASSGPAPFGA 428

  Fly   555 T--------ANGESGSSNDSSNQSTIKRPASM---YERRLVPNVAKGNTDIRNTTSMYQMAGDGK 608
            |        |.|.|.:|:.:..|:..:....:   ...::.|:.....|  ..|.||...||.|.
Mouse   429 TPSTNPFVAATGPSAASSTNPFQTNARGATGLSGAMHSQVFPHAHFAAT--FGTASMSMPAGFGT 491

  Fly   609 P 609
            |
Mouse   492 P 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap 48..164 CDD:279720 25/119 (21%)
Ank_2 187..279 CDD:289560 15/91 (16%)
ANK <187..270 CDD:238125 15/82 (18%)
ANK repeat 187..213 CDD:293786 4/25 (16%)
ANK repeat 215..247 CDD:293786 7/31 (23%)
ANK repeat 249..279 CDD:293786 3/29 (10%)
GIT_SHD 314..342 CDD:285690 7/27 (26%)
GIT 374..404 CDD:128828 5/29 (17%)
GIT1_C 609..727 CDD:289013 1/1 (100%)
Agfg1XP_006496493.1 COG5347 8..268 CDD:227651 73/408 (18%)
ArfGap_AGFG1 13..128 CDD:350082 29/130 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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