DRSC/TRiP Functional Genomics Resources

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Protein Alignment Git and AGAP4

DIOPT Version :10

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:NP_001263272.2 Gene:AGAP4 / 119016 HGNCID:23459 Length:686 Species:Homo sapiens


Alignment Length:285 Identity:77/285 - (27%)
Similarity:125/285 - (43%) Gaps:44/285 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IEAHRKLFIAPPDLDHSDPATPTISTRSKM--------PRGKSRLQTEVCGDCGAGDPSWASINR 64
            ::|.:...:|......|..:...::::||.        .||.:.     |.||...:|.|||:|.
Human   435 VQAIQSQILASLQSCESSKSKSQLTSQSKAMALQSIQNMRGNAH-----CVDCETQNPKWASLNL 494

  Fly    65 GILLCADCCSVHRSLGRHISIVKSLRQGNWEPSVLNFVNSLNAHGANSVWEHHLLDGSTNSTGGK 129
            |:|:|.:|..:|||||..:|.|:||...:|...:...::|:....|||:||        .|:.|:
Human   495 GVLMCIECSGIHRSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLANSIWE--------GSSQGQ 551

  Fly   130 HVPRWRKPTPKDALHPTKSDFIKAKHVNLTFVLKPSLQDDDDGNGSAGCLEQELSRQLHASVRTS 194
                 .||:.| :....|..:|::|:....| |.|           ..|.|..|.:||..:....
Human   552 -----TKPSEK-STREEKERWIRSKYEEKLF-LAP-----------LPCTELSLGQQLLRATADE 598

  Fly   195 NLETSLRFLVQGADPNYYH---EDKLSTPLHMAAKFGQASQIEMLLIYGADVNALDGNGMTPLEL 256
            :|:|::..|..|:......   |....|.||:|.:.|.....::|:.||.||.|.|.:|.|.|..
Human   599 DLQTAILLLAHGSREEVNETCGEGDGCTALHLACRKGNVVLAQLLIWYGVDVMARDAHGNTALTY 663

  Fly   257 ARANNHNTIAERLLDAMYDVTDRII 281
            ||..:.......||  .|...|:.:
Human   664 ARQASSQECINVLL--QYGCPDKCV 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap_GIT 39..155 CDD:350062 37/115 (32%)
ANKYR <187..>272 CDD:440430 25/87 (29%)
ANK repeat 187..213 CDD:293786 5/25 (20%)
ANK repeat 215..247 CDD:293786 11/31 (35%)
ANK repeat 249..279 CDD:293786 8/29 (28%)
GIT_SHD 314..342 CDD:462506
GIT_SHD 374..402 CDD:462506
GIT1_C 612..731 CDD:463492
AGAP4NP_001263272.2 PH_AGAP 280..447 CDD:241281 2/11 (18%)
ArfGap_AGAP2 464..572 CDD:350078 38/126 (30%)
ANKYR <591..>680 CDD:440430 25/90 (28%)
ANK repeat 591..621 CDD:293786 5/29 (17%)
ANK repeat 623..654 CDD:293786 11/30 (37%)
ANK repeat 656..681 CDD:293786 8/26 (31%)
Blue background indicates that the domain is not in the aligned region.

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