DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Git and ACAP3

DIOPT Version :10

Sequence 1:NP_610599.3 Gene:Git / 36122 FlyBaseID:FBgn0033539 Length:731 Species:Drosophila melanogaster
Sequence 2:XP_011538908.1 Gene:ACAP3 / 116983 HGNCID:16754 Length:844 Species:Homo sapiens


Alignment Length:492 Identity:123/492 - (25%)
Similarity:165/492 - (33%) Gaps:201/492 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSIIEAHRKLFIAPPDLDHSD-------PATPTI----STRSKMPRGKSRLQ-------TEVCGD 51
            :||..|:|:    .||..:|:       |:|.:|    .||.:..:|:|.||       ...|||
Human   370 ASIASAYRE----SPDSCYSERLDRTASPSTSSIDSATDTRERGVKGESVLQRVQSVAGNSQCGD 430

  Fly    52 CGAGDPSWASINRGILLCADCCSVHRSLGRHISIVKSLRQGNWEPSVLNFVNSLNAHGANSVWEH 116
            ||..||.|||||.|:|||.:|..:|||||.|.|.|:||...:|||.:|..:..|.....|.::| 
Human   431 CGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSAVNQIYE- 494

  Fly   117 HLLDGSTNSTGGKHVPRWRKPTPKDALHPTKSDFIKAKHVNLTFVLK----PSLQ---------- 167
                ......|.      ||||...: ...|..:||.|:|...|:.|    |:|:          
Human   495 ----AQCEGAGS------RKPTASSS-RQDKEAWIKDKYVEKKFLRKAPMAPALEAPRRWRVQKC 548

  Fly   168 ----------------------------------------------DDDD--------------- 171
                                                          |:.|               
Human   549 LRPHSSPRAPTARRKVRLEPVLPCVAALSSVGTLDRKFRRDSLFCPDELDSLFSYFDAGAAGAGP 613

  Fly   172 ----------------------GNGSA--------GCLEQELS-----------------RQL-- 187
                                  |:||.        |...:|.|                 |:|  
Human   614 RSLSSDSGLGGSSDGSSDVLAFGSGSVVDSVTEEEGAESEESSGEADGDTEAEAWGLADVRELHP 678

  Fly   188 ----HASVRTSNLETSLRFLVQGADPNYYH-EDKLSTPLHMAAKFGQASQIEMLLIYGADVNALD 247
                |.:.|..:|......|..||:.|:.. ||:..|||..|...|.....|.||..|||||..|
Human   679 GLLAHRAARARDLPALAAALAHGAEVNWADAEDEGKTPLVQAVLGGSLIVCEFLLQNGADVNQRD 743

  Fly   248 GNGMTPLELARANNHNTIAERLLDAMYDVTDRIITFLGGKKPDHASGRHM-----IIPDANGADI 307
            ..|..||      :|.|:..|        |.::..||......||..:..     |...|..|||
Human   744 SRGRAPL------HHATLLGR--------TGQVCLFLKRGADQHALDQEQRDPLAIAVQAANADI 794

  Fly   308 SEQLKIARGKLQLVPNKMFEELVMDLYDEVDRRECEA 344
            ...|::||         |.||:          ||.||
Human   795 VTLLRLAR---------MAEEM----------REAEA 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GitNP_610599.3 ArfGap_GIT 39..155 CDD:350062 46/122 (38%)
ANKYR <187..>272 CDD:440430 30/91 (33%)
ANK repeat 187..213 CDD:293786 8/31 (26%)
ANK repeat 215..247 CDD:293786 14/31 (45%)
ANK repeat 249..279 CDD:293786 7/29 (24%)
GIT_SHD 314..342 CDD:462506 6/27 (22%)
GIT_SHD 374..402 CDD:462506
GIT1_C 612..731 CDD:463492
ACAP3XP_011538908.1 BAR 16..225 CDD:472257
PH_ACAP 281..377 CDD:270070 3/6 (50%)
ArfGap_ACAP3 413..528 CDD:350075 47/126 (37%)
ANKYR <711..>798 CDD:440430 31/100 (31%)
ANK repeat 712..743 CDD:293786 13/30 (43%)
ANK repeat 745..776 CDD:293786 11/44 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.