DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11883 and cpdB

DIOPT Version :10

Sequence 1:NP_001097260.1 Gene:CG11883 / 36121 FlyBaseID:FBgn0033538 Length:792 Species:Drosophila melanogaster
Sequence 2:NP_418634.1 Gene:cpdB / 948729 ECOCYCID:EG10160 Length:647 Species:Escherichia coli


Alignment Length:600 Identity:119/600 - (19%)
Similarity:222/600 - (37%) Gaps:137/600 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 IITHGLTGRSTSISSQLEKTKKLLKMTEGEDKPLTILHYN----DVYNIESMAETEPVGGAARFA 243
            :|....|..:|.|::.:......|::.|..|     ||.|    |.|...:   ||.. |..|.|
E. coli     1 MIKFSATLLATLIAASVNAATVDLRIMETTD-----LHSNMMDFDYYKDTA---TEKF-GLVRTA 56

  Fly   244 TAIKSFAH--LNPLVLFSGDAFSPSMLSTFTQGE-----QMIPV---LNTVGTHCAVFGNHDFDH 298
            :.|....:  .|.:::.:||....|.|:.:...:     .:.||   |||:.......|||:|::
E. coli    57 SLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFNY 121

  Fly   299 GLDVLVKLIKQTEFPWLMSNVVDNETGRPLGGGKISHFILHN-----------QISIGLIGLVER 352
            |||.|...:...:||::.:||:|..|.:|:    .:.:::.:           .:.||.||:|..
E. coli   122 GLDYLKNALAGAKFPYVNANVIDARTKQPM----FTPYLIKDTEVVDKDGKKQTLKIGYIGVVPP 182

  Fly   353 EWLETLPTIDPNEVTYIDYVEAGNKLARELRNEGCDLIIALTH---------MRTPNDINLAEKC 408
            :.:.........:||..|..|...|...|:|.:|.|:::.|.|         :...|.:....:.
E. coli   183 QIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAENSVYYLSEI 247

  Fly   409 NGIDIILGGHDHV----REVTEINGKMIVKSGT-------------------------DFQQFSV 444
            .|::.|:.||.|.    ::..:|.|..|.| ||                         |..::.|
E. coli   248 PGVNAIMFGHAHAVFPGKDFADIEGADIAK-GTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQV 311

  Fly   445 ITIERDA------ANREHFTTDVKCFDVTAKIPEDPE---LKQELSKYAKFIESKLSDVMGVFSV 500
            ...:.:|      ||::....:......|.|...|..   :.:.:.|.|..:.|.|:.|....:|
E. coli   312 TQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTV 376

  Fly   501 ELDGRFSRVRTQETNLGNWVCDVVLAAVGADVVILNGGTFRSDRVHPV----GAFTMGDLVNVIP 561
            ::.....:...:....|:  .|:....|.:.......|..::|....|    |..|..:..::..
E. coli   377 QVVNNAQKAYVEHYIQGD--PDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYL 439

  Fly   562 MRDPLILLEVKGKILWQALENGVSAYPKLEG-----------------RFPQVSGISFAFDPQAE 609
            ..:.||:::..||.:.:.||.....:.:::.                 .|..:.|:::..| ..:
E. coli   440 YPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQID-VTQ 503

  Fly   610 PGKRIDPQLIQVGDEYLNLEQSYKLCVKSYIFMG--CDGYTMFKDATVLMDDDACPELGITLQNH 672
            |. |.|.:...:.   .|.|:     :|:..|.|  .|...||..||                |:
E. coli   504 PA-RYDGECQMIN---ANAER-----IKNLTFNGKPIDPNAMFLVAT----------------NN 543

  Fly   673 FKAINSRKCGQNTKH 687
            ::|...:..|....|
E. coli   544 YRAYGGKFAGTGDSH 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11883NP_001097260.1 MPP_CG11883_N 216..473 CDD:277351 71/325 (22%)
5_nucleotid_C 494..652 CDD:427027 30/180 (17%)
cpdBNP_418634.1 cpdB 1..647 CDD:236506 118/599 (20%)

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