DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment psq and Nacc1

DIOPT Version :9

Sequence 1:NP_001369078.1 Gene:psq / 36118 FlyBaseID:FBgn0263102 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_080064.3 Gene:Nacc1 / 66830 MGIID:1914080 Length:514 Species:Mus musculus


Alignment Length:480 Identity:86/480 - (17%)
Similarity:159/480 - (33%) Gaps:135/480 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADI 80
            |:.|::.....:.|....:.||::..:..:.|||:.||:|.|:||:.|.  |..:...:.|||.:
Mouse    11 NFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLF--NSSRSAVVELPAAV 73

  Fly    81 IFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQ 145
            .....:.|:.|.|.|.:.:...:...|:.||..|:|:.:.|         ......:.||     
Mouse    74 QPQSFQQILTFCYTGRLSMNMGDQFLLIYTAGFLQIQEIME---------KGTEFFLKVS----- 124

  Fly   146 AVVGNIVNAAIVPGAPSPSLEQQQQHHQQQQQQQAQEQHQQQQVHAQQQQQQQQQINAALLTQHG 210
                            |||.:.|..|.::....:.|                             
Mouse   125 ----------------SPSCDSQGLHPEEAPSSEPQ----------------------------- 144

  Fly   211 VSSGSVSLSGQLLSSSASGSSGSLAGGQQASQTPSGLQPTPRKSRLKRSKSPDLSSGGGAGSSGG 275
                  |...|.|...|..:...|....:..|....:|.||...||..|...:   .||:|.:.|
Mouse   145 ------SPVAQTLGWPACSTPLPLVSRVKTEQELDSVQCTPMAKRLWDSSQKE---AGGSGGNNG 200

  Fly   276 SSSGSTQQQPQPAHHHHPQTI-LIQGQNPNSIVSL----------QQTADGNYIPVSGSGDDSDA 329
            |...:....|..|.:..||.: :.......::|::          ::|:.|.....:.....|..
Mouse   201 SRKMAKFSTPDLALNRMPQPLSMATATAAVAVVAVGGCVSGPSMSERTSPGTSSAYTSDSPSSYH 265

  Fly   330 EDHEHEHNHGHGHGHGGHTHGHGHSHEHSHDHEHEHKPNKICK--TEHSVASPASNSSSASNNAA 392
            .:.:.|.:.|                |...|.::    .:||.  |.:|:.:....:...     
Mouse   266 NEEDEEEDAG----------------EEGTDEQY----RQICNMYTMYSMLNVGQTAEKV----- 305

  Fly   393 GVSGVTSTGQAIVTQIVV-----ARDGKDTKNMTSLGMGMNGGLL-------GVPMGFLDFTPEP 445
                     :|:..|:|:     .|..:|..::.:..:...|...       |.|...|:..   
Mouse   306 ---------EALPEQVVLESRSRIRVRQDLASLPAELINQIGNRCHPKLYDEGDPSEKLELV--- 358

  Fly   446 PAPSATPVTVTEHVDLSCNPSTDTR 470
               :.|.|.:|....::|:.|..||
Mouse   359 ---TGTNVYITRAQLMNCHVSAGTR 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
psqNP_001369078.1 BTB_POZ_BAB-like 34..118 CDD:349624 25/83 (30%)
HTH_psq 717..>747 CDD:283007
HTH_psq 767..804 CDD:283007
HTH_psq 821..866 CDD:283007
HTH_psq 873..916 CDD:283007
Nacc1NP_080064.3 BTB_POZ_BTBD14B_NAC1 3..125 CDD:349599 31/145 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..205 8/24 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..279 6/52 (12%)
BEN 382..460 CDD:214981
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 73 1.000 Inparanoid score I5272
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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