Protein Alignment psq and CG6118

DIOPT Version :9

• Sequence 1: NP_001369078.1
• Gene: psq / 36118
• FlyBaseID: FBgn0263102
• Length: 1170
• Species: Drosophila melanogaster
• Sequence 2: NP_001097806.1
• Gene: CG6118 / 41884
• FlyBaseID: FBgn0038339
• Length: 967
• Species: Drosophila melanogaster
• Alignment Length: 689
• Identity: 152/689 - (22%)
• Similarity: 247/689 - (35%)
• Gaps: 227/689 - (32%)

  Fly     8 QYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHP 72
            ||. |.|||:...|...|..|::|...||||::......||||:|||.||.|||::.||||..||
  Fly   392 QYL-LSWNNFHGNMCRGFHSLQKDEKMVDVTIAAGGKIFKAHKLVLSVCSPYFQQIFLENPSSHP 455

  Fly    73 TIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENAD-DLNDAAT-- 134
             |:|.||:..:.:..::||:|.|:::|...:|...|:.||.:||||| .|.:|.| |.:|.::
  Fly   456 -ILLMADVEASHMAGLLDFMYSGQVNVKYEDLPVFLKVAEAMKIKGL-HTEKNLDSDASDISSPH 518

  Fly   135 ---------ATITVSENIQQAVVGNIVNAAIVPGAPSPSLEQQQQHHQQQQQQQAQEQHQQQQVH 190
                     ...|.|.||...      :||...||||
  Fly   519 ESDGTECRYERGTHSVNITSG------HAAGYGGAPS---------------------------- 549

  Fly   191 AQQQQQQQQQINAALLTQHGVSSGSVSLSG-----QLLSSSASGSSGSLAGGQQASQTPSGLQPT 250
            :||                  ||.|.||:|     ..|||..||:. :.||.::..::.:.|..|
  Fly   550 SQQ------------------SSPSPSLNGPNRCPTPLSSGGSGNP-NYAGFREHIKSKATLAET 595

  Fly   251 PRKSRLKRSKSPDLSS------GGGAGS----SGGSSS-----GSTQQQPQPAHHHH----PQTI 296
            ..|: |.|:.:.:.||      ||..||    ...|:|     .::::....|...|    .:.|
  Fly   596 FMKN-LNRNNNNNNSSNNYNHLGGSNGSLNLTEADSNSFAILQANSKKMLDSARKQHKYLAKRKI 659

  Fly   297 LIQ------GQNPNSIVSLQQTADGNYIPVSGSGDDSDAEDHEHEHNHGHGHGHGG--------- 346
            |:.      |:.     .|::.....|         ..||.|:...|:.|.|....
  Fly   660 LMHYNTELGGEK-----RLKEMERDRY---------PSAEQHDDALNNNHSHAQDNIMEPIITTI 710

  Fly   347 -------HTHGHGHS----HEHSHDHEHEHKPNKICKTEHSVASPASNSSSASNNAAGVSGVTST 400
                   .||.:...    ..|...:...:..|:.....:|.:||.||..:....|..
  Fly   711 VPQTPPPSTHNNNFKIRLVESHHLTNNSNNNQNQSSNNNNSSSSPQSNDCNNDEEALN------- 768

  Fly   401 GQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNP 465
                :.||..|...::.                      :.||....|:.....:...|....:|
  Fly   769 ----LVQIPNANGSRNR----------------------EATPTCATPTPDIQLIKREVKTELSP 807

  Fly   466 STDTRDLSNTT------------EPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHIK 518
            :   .:|||..            ...|.:|:.:    .||.....:.::...|.::|:.|.
  Fly   808 A---ENLSNNNGHDDEMAGAGFDRKYDDNNNNS----GLDMETDSNNNNSKPGGDNNNGLA---- 861

  Fly   519 SEVIEAKHLAAQHHALSQA-----QQQHAHHQAHQQHQQHQQQQH------------QQQQQHLH 566
                    ||...|.|..|     :|.|..|:  .|.||.::..|            ....|||.
  Fly   862 --------LALGKHKLLSAINRNIEQDHPDHE--HQDQQDREADHGGNNCNSDDNNNNNHSQHLD 916

  Fly   567 AQQL-----------LAQSQLQQQQQQQQQQQQHHQQQQ 594
            ...:           |....|:.:::|::::::..::::
  Fly   917 LSTIKNIATAEILCGLKSKVLKLEEEQRERERERERERE 955

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
psq	NP_001369078.1	BTB_POZ_BAB-like	34..118	CDD:349624	37/83 (45%)
		HTH_psq	717..>747	CDD:283007
		HTH_psq	767..804	CDD:283007
		HTH_psq	821..866	CDD:283007
		HTH_psq	873..916	CDD:283007
CG6118	NP_001097806.1	Myb_DNA-bind_4	20..97	CDD:290549
		BTB	408..508	CDD:279045	45/101 (45%)
		BTB	419..510	CDD:197585	42/92 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	68	1.000	Domainoid score	I9675
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1229475at2759
OrthoFinder	1	1.000	-	-		FOG0000141
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23110
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	5.020