DRSC/TRiP Functional Genomics Resources

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Protein Alignment psq and CG32121

DIOPT Version :10

Sequence 1:NP_001369078.1 Gene:psq / 36118 FlyBaseID:FBgn0263102 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_001097599.1 Gene:CG32121 / 317867 FlyBaseID:FBgn0052121 Length:648 Species:Drosophila melanogaster


Alignment Length:644 Identity:141/644 - (21%)
Similarity:216/644 - (33%) Gaps:225/644 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLL--LENPCK 70
            |.|.|||:|:|.::.|....|.:.....|||:|.|...|:||:|||||||::|..:.  || ...
  Fly    28 QQFCLRWHNHQTSLLSTLPILLDQSHLTDVTISAEGRQLRAHRVVLSACSSFFMDIFRALE-ASN 91

  Fly    71 HPTIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAEN---------- 125
            ||.||:|. ..|..:.:::.|:|.||::|.|.::..||..||.|.||||.:...|          
  Fly    92 HPVIIIPG-ASFGAIVSLLTFMYSGEVNVYEEQIPMLLNLAETLGIKGLADVQNNNLPKTARSGG 155

  Fly   126 ---ADDLNDAA-------------TATITVSEN----------------IQQAVVGN---IVNAA 155
               .|..|:.:             |.|:|.|..                :...::.|   .||::
  Fly   156 GSYMDTTNEKSSEFERPTTPSPTPTPTLTPSHTPTPSHSLPLPQLPSAALNTPLLANKLGSVNSS 220

  Fly   156 IVPGAP----------SPSLEQQQQHHQQQQQQQAQE--QHQQQQVHAQQQQQQQQQINAALLTQ 208
            .:...|          .|||..|..:..|....:..|  ...|||....|...|:.|:.....  
  Fly   221 GMGTTPLENLFKSLQFYPSLLPQPLNFSQTALNKTTELLAKYQQQCQLYQSGMQEDQLETDCF-- 283

  Fly   209 HGVSSGSVSLSGQLLSSSASGSSGSLAGGQQASQTPSGLQPTPRKSRLKRS--KSPDLSSGGGAG 271
                 ||..|.|.                          .|.....||::|  |:|..||     
  Fly   284 -----GSKRLKGD--------------------------SPPKELRRLEKSLLKNPKSSS----- 312

  Fly   272 SSGGSSSGSTQQ--QPQP-------------AHHHHPQ------------TILIQGQNPNSIVSL 309
            ::..|||.|.|:  .|.|             ..|..||            :.|.|||..:|...|
  Fly   313 TTNSSSSKSPQECSNPNPIVATSPVTLAPPTMAHFSPQLPVVKCSSASYPSALGQGQLYSSKPPL 377

  Fly   310 ----------QQTADGNYIPVSGSGDDSDAEDHEHEHNHGHGHGHGGHTHGHGHSHEHSHDHEHE 364
                      ||.|..::.|..|......|||                   |.....|...::.|
  Fly   378 YSAAVTPTAAQQAAQMHHHPQPGPSPYISAED-------------------HAKLQLHIEQYQRE 423

  Fly   365 HKPNKICKTEHSVASPASNSSSASNNAAGVSGVTSTGQAIVTQIVVARDGKDTKNMTSLGMGMNG 429
                               :::|:..|||       |.|:|:       .|...|:.||....:.
  Fly   424 -------------------AAAAAAAAAG-------GMALVS-------AKSEPNLLSLSADRDK 455

  Fly   430 GLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNTTE-PLDIDNH--------L 485
            .|...|:       :||:.|....|.     ..|:     :.|||... .:.::.|        :
  Fly   456 SLATAPI-------KPPSNSKLYATC-----FICH-----KQLSNQYNLRVHLETHQNVRYACNV 503

  Fly   486 AQQIHRLDQSPMHSISHHHTG------DESNSNLVQHIKSEVIEAK---HLAAQHHALS 535
            ...:.|...:....:|:.|.|      :|:....|..:.:..:...   .::|.|...|
  Fly   504 CSHVSRSKDALRKHVSYRHPGAPSPCENEARRKRVSKLAATTVPTSTPMSMSASHTVTS 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
psqNP_001369078.1 BTB_POZ_BAB-like 34..118 CDD:349624 36/85 (42%)
HTH_psq 717..>747 CDD:283007
HTH_psq 767..804 CDD:283007
HTH_psq 821..866 CDD:283007
HTH_psq 873..916 CDD:283007
CG32121NP_001097599.1 BTB_POZ_BAB-like 54..138 CDD:349624 36/85 (42%)
C2H2 Zn finger 474..494 CDD:275370 4/29 (14%)
C2H2 Zn finger 501..518 CDD:275370 1/16 (6%)
Blue background indicates that the domain is not in the aligned region.

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