DRSC/TRiP Functional Genomics Resources

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Protein Alignment psq and CG32121

DIOPT Version :9

Sequence 1:NP_001369078.1 Gene:psq / 36118 FlyBaseID:FBgn0263102 Length:1170 Species:Drosophila melanogaster
Sequence 2:NP_001097599.1 Gene:CG32121 / 317867 FlyBaseID:FBgn0052121 Length:648 Species:Drosophila melanogaster


Alignment Length:644 Identity:141/644 - (21%)
Similarity:216/644 - (33%) Gaps:225/644 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLL--LENPCK 70
            |.|.|||:|:|.::.|....|.:.....|||:|.|...|:||:|||||||::|..:.  || ...
  Fly    28 QQFCLRWHNHQTSLLSTLPILLDQSHLTDVTISAEGRQLRAHRVVLSACSSFFMDIFRALE-ASN 91

  Fly    71 HPTIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAEN---------- 125
            ||.||:|. ..|..:.:::.|:|.||::|.|.::..||..||.|.||||.:...|          
  Fly    92 HPVIIIPG-ASFGAIVSLLTFMYSGEVNVYEEQIPMLLNLAETLGIKGLADVQNNNLPKTARSGG 155

  Fly   126 ---ADDLNDAA-------------TATITVSEN----------------IQQAVVGN---IVNAA 155
               .|..|:.:             |.|:|.|..                :...::.|   .||::
  Fly   156 GSYMDTTNEKSSEFERPTTPSPTPTPTLTPSHTPTPSHSLPLPQLPSAALNTPLLANKLGSVNSS 220

  Fly   156 IVPGAP----------SPSLEQQQQHHQQQQQQQAQE--QHQQQQVHAQQQQQQQQQINAALLTQ 208
            .:...|          .|||..|..:..|....:..|  ...|||....|...|:.|:.....  
  Fly   221 GMGTTPLENLFKSLQFYPSLLPQPLNFSQTALNKTTELLAKYQQQCQLYQSGMQEDQLETDCF-- 283

  Fly   209 HGVSSGSVSLSGQLLSSSASGSSGSLAGGQQASQTPSGLQPTPRKSRLKRS--KSPDLSSGGGAG 271
                 ||..|.|.                          .|.....||::|  |:|..||     
  Fly   284 -----GSKRLKGD--------------------------SPPKELRRLEKSLLKNPKSSS----- 312

  Fly   272 SSGGSSSGSTQQ--QPQP-------------AHHHHPQ------------TILIQGQNPNSIVSL 309
            ::..|||.|.|:  .|.|             ..|..||            :.|.|||..:|...|
  Fly   313 TTNSSSSKSPQECSNPNPIVATSPVTLAPPTMAHFSPQLPVVKCSSASYPSALGQGQLYSSKPPL 377

  Fly   310 ----------QQTADGNYIPVSGSGDDSDAEDHEHEHNHGHGHGHGGHTHGHGHSHEHSHDHEHE 364
                      ||.|..::.|..|......|||                   |.....|...::.|
  Fly   378 YSAAVTPTAAQQAAQMHHHPQPGPSPYISAED-------------------HAKLQLHIEQYQRE 423

  Fly   365 HKPNKICKTEHSVASPASNSSSASNNAAGVSGVTSTGQAIVTQIVVARDGKDTKNMTSLGMGMNG 429
                               :::|:..|||       |.|:|:       .|...|:.||....:.
  Fly   424 -------------------AAAAAAAAAG-------GMALVS-------AKSEPNLLSLSADRDK 455

  Fly   430 GLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNTTE-PLDIDNH--------L 485
            .|...|:       :||:.|....|.     ..|:     :.|||... .:.::.|        :
  Fly   456 SLATAPI-------KPPSNSKLYATC-----FICH-----KQLSNQYNLRVHLETHQNVRYACNV 503

  Fly   486 AQQIHRLDQSPMHSISHHHTG------DESNSNLVQHIKSEVIEAK---HLAAQHHALS 535
            ...:.|...:....:|:.|.|      :|:....|..:.:..:...   .::|.|...|
  Fly   504 CSHVSRSKDALRKHVSYRHPGAPSPCENEARRKRVSKLAATTVPTSTPMSMSASHTVTS 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
psqNP_001369078.1 BTB_POZ_BAB-like 34..118 CDD:349624 36/85 (42%)
HTH_psq 717..>747 CDD:283007
HTH_psq 767..804 CDD:283007
HTH_psq 821..866 CDD:283007
HTH_psq 873..916 CDD:283007
CG32121NP_001097599.1 BTB 48..142 CDD:279045 40/95 (42%)
BTB 56..149 CDD:197585 40/94 (43%)
C2H2 Zn finger 474..494 CDD:275370 4/29 (14%)
C2H2 Zn finger 501..518 CDD:275370 1/16 (6%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I9606
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.020

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